RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 OOEPA6NGQ2 149 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 CEACAM18A8MTB9 384 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 E9PI62 339 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 J3QT63 122 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 CDIPTO14735 213 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 NOS1APO75052 506 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-212ENST00000489728 FOXH1O75593 365 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 PRKACBP22694 351 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 MPZP25189 248 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 FUT6P51993 359 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 ACSM1Q08AH1 577 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 MICBQ29980 383 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 ESCO2Q56NI9 601 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 DMKNQ6E0U4 476 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-212ENST00000489728 FAM90A1Q86YD7 464 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 PARP16Q8N5Y8 322 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 TEX29Q8N6K0 151 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 NANOGP1Q8N7R0 232 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF671Q8TAW3 534 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 GPR148Q8TDV2 347 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 LRRC29Q8WV35 223 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 AQP3Q92482 292 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 NEIL1Q96FI4 390 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-212ENST00000489728 TMEM246Q9BRR3 403 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 PKIBQ9C010 78 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 FGF23Q9GZV9 251 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-212ENST00000489728 GPR173Q9NS66 373 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 RASL12Q9NYN1 266 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 KAAG1Q9UBP8 84 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 CLEC2DQ9UHP7 191 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 ABCA2Q9BZC7 2435 aa9.28□□□□□ -0.92
CPSF7-212ENST00000489728 FAM157AC9JC47 383 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 J3QLI3 93 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 DENRO43583 198 aaKnown RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 PLPP2O43688 288 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 LMX1BO60663 402 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 MRPS14O60783 128 aaKnown RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 TGFAP01135 160 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 CD2P06729 351 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 WNT2P09544 360 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 RPS2P15880 293 aaKnown RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 HNF1AP20823 631 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 CRHBPP24387 322 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 C21orf33P30042 268 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 NPY4RP50391 375 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 IL24Q13007 206 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 UBE2V2Q15819 145 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF826PQ6ZT77 177 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 LHFPL2Q6ZUX7 228 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 SERPINA12Q8IW75 414 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 RDH10Q8IZV5 341 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 POC1AQ8NBT0 407 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 OR5D14Q8NGL3 314 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 GATAD2BQ8WXI9 593 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 RPL3LQ92901 407 aaKnown RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 TMEM186Q96B77 213 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 ADAT3Q96EY9 351 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-212ENST00000489728 CNBD2Q96M20 576 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 OR8B2Q96RD0 313 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 PDCD1LG2Q9BQ51 273 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 YAE1D1Q9NRH1 226 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 UBAP1Q9NZ09 502 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 CDC42EP3Q9UKI2 254 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 DHDHQ9UQ10 334 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF281Q9Y2X9 895 aa9.27□□□□□ -0.93
CPSF7-212ENST00000489728 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 TNFRSF13BO14836 293 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 RGS10O43665 173 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 ATF1P18846 271 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 CD80P33681 288 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 HAAOP46952 286 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 RBP2P50120 134 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 GTF2A1P52655 376 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 RIPPLY3P57055 190 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 GABARAPL2P60520 117 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 IRF3Q14653 427 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 SMIM21Q3B7S5 101 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 ATPAF1Q5TC12 328 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 XAF1Q6GPH4 301 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 HAGHLQ6PII5 290 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 PRSS48Q7RTY5 328 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 OR51A4Q8NGJ6 313 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 OR10AC1Q8NH08 325 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 FGGYQ96C11 551 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 BORCS8Q96FH0 119 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 SSBP3Q9BWW4 388 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 YTHDF1Q9BYJ9 559 aaKnown RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 RHOFQ9HBH0 211 aa9.26□□□□□ -0.93
CPSF7-212ENST00000489728 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-212ENST00000489728 A0A0G2JMP0 313 aa9.25□□□□□ -0.93
CPSF7-212ENST00000489728 TRBV5-5A0A0J9YX44 114 aa9.25□□□□□ -0.93
CPSF7-212ENST00000489728 A0A0X1KG70 313 aa9.25□□□□□ -0.93
CPSF7-212ENST00000489728 C3orf80F5H4A9 247 aa9.25□□□□□ -0.93
CPSF7-212ENST00000489728 GPR37O15354 613 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms