RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TMEM100Q9NV29 134 aa12.09□□□□□ -0.47
VPS26A-205ENST00000489656 EXTL2Q9UBQ6 330 aa12.09□□□□□ -0.47
VPS26A-205ENST00000489656 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
VPS26A-205ENST00000489656 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
VPS26A-205ENST00000489656 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
VPS26A-205ENST00000489656 A0A0A6YYH2 397 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.08□□□□□ -0.48
VPS26A-205ENST00000489656 A6NJ64 397 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 VSIG8P0DPA2 414 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 MNDAP41218 407 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 UNC119Q13432 240 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF79Q15937 498 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 FAM76BQ5HYJ3 339 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 SLC22A25Q6T423 547 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 FAM131AQ6UXB0 335 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 SPERTQ8NA61 448 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 OR13G1Q8NGZ3 307 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 KCNG3Q8TAE7 436 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
VPS26A-205ENST00000489656 RFT1Q96AA3 541 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 S100A16Q96FQ6 103 aaKnown RBP12.08□□□□□ -0.48
VPS26A-205ENST00000489656 RNF170Q96K19 258 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
VPS26A-205ENST00000489656 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 CA10Q9NS85 328 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 IL36GQ9NZH8 169 aa12.08□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 TMEM210A6NLX4 147 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 MLNRO43193 412 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF780AO75290 641 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 CTAG2O75638 210 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 SCGNO76038 276 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 CD3EP07766 207 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 IGFBP2P18065 325 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 MPZP25189 248 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 GPM6AP51674 278 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 EFNB2P52799 333 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 SELENOVP59797 346 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 PLA2G7Q13093 441 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 DCTN2Q13561 401 aaKnown RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 Q6ZR03 302 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 C1QL2Q7Z5L3 287 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 TMEM200AQ86VY9 491 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF573Q86YE8 665 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 DMRTC2Q8IXT2 367 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 S100A13Q99584 98 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 CCDC32Q9BV29 185 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 PKIBQ9C010 78 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 SRRQ9GZT4 340 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 CST11Q9H112 138 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 KCNK15Q9H427 330 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 RNF115Q9Y4L5 304 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 ATP23Q9Y6H3 246 aa12.07□□□□□ -0.48
VPS26A-205ENST00000489656 RAI1Q7Z5J4 1906 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-205ENST00000489656 LRP5LA4QPB2 252 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 WIPF3A6NGB9 483 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 VSTM5A8MXK1 200 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 J3QRK9 145 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 SIAH2O43255 324 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 PITPNBP48739 271 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 MZT1Q08AG7 82 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
VPS26A-205ENST00000489656 GPR176Q14439 515 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 OR8G1Q15617 311 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 PYHIN1Q6K0P9 492 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 ADAM5Q6NVV9 412 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 BIVMQ86UB2 503 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 ZNF611Q8N823 705 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 GDPD1Q8N9F7 314 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 Q8NFD4 153 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 OR5D18Q8NGL1 313 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 OR8S1Q8NH09 359 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 DVL3Q92997 716 aaPredicted RBP12.06□□□□□ -0.48
VPS26A-205ENST00000489656 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 SDHCQ99643 169 aaPredicted RBP12.06□□□□□ -0.48
VPS26A-205ENST00000489656 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
VPS26A-205ENST00000489656 TMEM204Q9BSN7 226 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
VPS26A-205ENST00000489656 METTL9Q9H1A3 318 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 OR51I2Q9H344 312 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 PCDHB16Q9NRJ7 776 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 ING4Q9UNL4 249 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 DOPEY1Q5JWR5 2465 aa12.06□□□□□ -0.48
VPS26A-205ENST00000489656 ROS1P08922 2347 aa12.05□□□□□ -0.48
VPS26A-205ENST00000489656 UBR5O95071 2799 aaPredicted RBP12.05□□□□□ -0.48
VPS26A-205ENST00000489656 METTL21EPA6NDL7 271 aa12.05□□□□□ -0.48
VPS26A-205ENST00000489656 CTDSPLO15194 276 aa12.05□□□□□ -0.48
VPS26A-205ENST00000489656 XRCC3O43542 346 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms