RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZNF841Q6ZN19 808 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 TFAP2CQ92754 450 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 TECTBQ96PL2 329 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 ISG20L2Q9H9L3 353 aaKnown RBP14.47□□□□□ -0.09
MDC1-206ENST00000489540 KAAG1Q9UBP8 84 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 SLC7A11Q9UPY5 501 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 INSIG2Q9Y5U4 225 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 PQLC2LA1A4F0 135 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 H0YHG0 523 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 GATBO75879 557 aaKnown RBP14.46□□□□□ -0.09
MDC1-206ENST00000489540 SCGB2A2Q13296 93 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 MED21Q13503 144 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 DMRTC1Q5HYR2 192 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 CD276Q5ZPR3 534 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 BTNL3Q6UXE8 466 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 RAB40AQ8WXH6 277 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 PP6455Q8WZ26 134 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 AQP3Q92482 292 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 DNAJB11Q9UBS4 358 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 HHLA2Q9UM44 414 aa14.46□□□□□ -0.09
MDC1-206ENST00000489540 IGHV3OR15-7A0A075B7D8 119 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 OR4C45A6NMZ5 311 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 H3BSH0 61 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 AKR7A2O43488 359 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 GNAO1P09471 354 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 LIMS3P0CW19 117 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 LIMS4P0CW20 117 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 MYL12AP19105 171 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 TGM4P49221 684 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 C11orf91Q3C1V1 193 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 ATPAF1Q5TC12 328 aaPredicted RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 HAGHLQ6PII5 290 aaPredicted RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 TMPRSS11AQ6ZMR5 421 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 ZNF676Q8N7Q3 588 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 FBLIM1Q8WUP2 373 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 TMEM80Q96HE8 168 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 CHST5Q9GZS9 411 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 CHCHD3Q9NX63 227 aaKnown RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 RASL12Q9NYN1 266 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 METRNQ9UJH8 293 aa14.45□□□□□ -0.1
MDC1-206ENST00000489540 DIMT1Q9UNQ2 313 aaKnown RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 CAB39Q9Y376 341 aaPredicted RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 EXOSC1Q9Y3B2 195 aaKnown RBP14.45□□□□□ -0.1
MDC1-206ENST00000489540 LOC105371242A0A075B767 164 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 KIR2DS1A0A191URI9 304 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 EFCAB10A6NFE3 127 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 TMPRSS2O15393 492 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 RHBDL1O75783 438 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 AVPP01185 164 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 CCDC159P0C7I6 412 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 GLRA1P23415 457 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 HAAOP46952 286 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 FUT6P51993 359 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 PAX2Q02962 417 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 PAX8Q06710 450 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 UBE2V2Q15819 145 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 C1orf229Q6ZS94 237 aaPredicted RBP14.44□□□□□ -0.1
MDC1-206ENST00000489540 SLC36A1Q7Z2H8 476 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 NANPQ8TBE9 248 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 NRG4Q8WWG1 115 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 GGHQ92820 318 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 MRI1Q9BV20 369 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 DNTTIP1Q9H147 329 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 VCX3BQ9H321 246 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 CTSZQ9UBR2 303 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 OPN4Q9UHM6 478 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 POLDIP2Q9Y2S7 368 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 AUP1Q9Y679 476 aa14.44□□□□□ -0.1
MDC1-206ENST00000489540 IGHV2-70DA0A0C4DH43 119 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 TMEM212A6NML5 194 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 J3QT63 122 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 PIPP12273 146 aaPredicted RBP14.43□□□□□ -0.1
MDC1-206ENST00000489540 ETV1P50549 477 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 GMFBP60983 142 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 UTS2BQ765I0 119 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 C1QL2Q7Z5L3 287 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 TMIGD2Q96BF3 282 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 FGGYQ96C11 551 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 SEH1LQ96EE3 360 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 CCL13Q99616 98 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 COMMD4Q9H0A8 199 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 WDR13Q9H1Z4 485 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 PLCXD1Q9NUJ7 323 aa14.43□□□□□ -0.1
MDC1-206ENST00000489540 CNOT2Q9NZN8 540 aaKnown RBP14.43□□□□□ -0.1
MDC1-206ENST00000489540 SVEP1Q4LDE5 3571 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 FAM230AA0A1W2PPH8 454 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 E9PI62 339 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 DVL1O14640 695 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 NOS1APO75052 506 aaPredicted RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 ECDO95905 644 aaPredicted RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 LIPFP07098 398 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 ACAA1P09110 424 aaPredicted RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 ZNF20P17024 532 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 CNN3Q15417 329 aaKnown RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 CCDC58Q4VC31 144 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 STUMQ69YW2 141 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 POC1AQ8NBT0 407 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 DNAAF1Q8NEP3 725 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 OR5T2Q8NGG2 359 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms