RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ARF6P62330 175 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 IKZF1Q13422 519 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 TMED1Q13445 227 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 KIR3DL3Q8N743 410 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 PACRGLQ8N7B6 248 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 OR8J1Q8NGP2 316 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 RFKQ969G6 155 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 APOL4Q9BPW4 351 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 FGF23Q9GZV9 251 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 WDR13Q9H1Z4 485 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 OR51I2Q9H344 312 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 RIBC2Q9H4K1 309 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 SNTG1Q9NSN8 517 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 ACOXLQ9NUZ1 547 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 ONECUT1Q9UBC0 465 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 NLKQ9UBE8 527 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 OR52A1Q9UKL2 312 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 TENM1Q9UKZ4 2725 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 MDFIC2A0A1B0GVS7 189 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 A0A1B0GW55 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 OR2AT4A6NND4 320 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 HOXA3O43365 443 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 FCN3O75636 299 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 NRASP01111 189 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 OR2T7P0C7T2 308 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L2P0CJ85 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L3P0CJ86 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L4P0CJ87 422 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L5P0CJ88 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L6P0CJ89 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L7P0CJ90 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 PEX2P28328 305 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 HTR1FP30939 366 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 CLVS2Q5SYC1 327 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4L9Q6RFH8 374 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF788Q6ZQV5 615 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 MOB3CQ70IA8 216 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 ELMOD2Q8IZ81 293 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 YIPF7Q8N8F6 280 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 LY6G5BQ8NDX9 201 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 OR2T27Q8NH04 317 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 ANGPTL6Q8NI99 470 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 C8orf46Q8TAG6 207 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 LHX4Q969G2 390 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 TMIGD2Q96BF3 282 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 SEH1LQ96EE3 360 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 PLEKHA1Q9HB21 404 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 USE1Q9NZ43 259 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX4Q9UBX2 424 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 SLC25A10Q9UBX3 287 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 POMT1Q9Y6A1 747 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 V9GYS6 101 aa11.4□□□□□ -0.58
SPTLC1-207ENST00000488921 DLGAP1O14490 977 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 SIGLEC5O15389 551 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 ALPLP05186 524 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 ATP6V1E1P36543 226 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 CAV3P56539 151 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 GUCA2AQ02747 115 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 HAGHLQ6PII5 290 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 METAP1DQ6UB28 335 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 Q6YL49 198 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNF573Q86YE8 665 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 CCDC54Q8NEL0 328 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 AQP3Q92482 292 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 RDH12Q96NR8 316 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 GAFA1Q96PS6 74 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 TBX5Q99593 518 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 SLC29A1Q99808 456 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 IMPAD1Q9NX62 359 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 RASL12Q9NYN1 266 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 MRM2Q9UI43 246 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 POLDIP2Q9Y2S7 368 aa11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 CAB39Q9Y376 341 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-207ENST00000488921 J3QT63 122 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 RHBDL1O75783 438 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 SULT1C4O75897 302 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 RPP14O95059 124 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 ACAA1P09110 424 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 NDUFB7P17568 137 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 AMY2BP19961 511 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 GABRA2P47869 451 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 TMEM42Q69YG0 159 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms