RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CAB39Q9Y376 341 aaPredicted RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 FBN2P35556 2912 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 ZNF608Q9ULD9 1512 aaPredicted RBP0.74□□□□□ -2.29
SMC4-219ENST00000487747 PLXNB3Q9ULL4 1909 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 H3BQ85 93 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 XRCC2O43543 280 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 PTHP01270 115 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 KLF3P57682 345 aaPredicted RBP0.74□□□□□ -2.29
SMC4-219ENST00000487747 ATP5G2Q06055 141 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 FMODQ06828 376 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 TRDNQ13061 729 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 BEX5Q5H9J7 111 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 TWF2Q6IBS0 349 aaKnown RBP0.74□□□□□ -2.29
SMC4-219ENST00000487747 TMEM53Q6P2H8 277 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 BZW1Q7L1Q6 419 aaKnown RBP0.74□□□□□ -2.29
SMC4-219ENST00000487747 FAM122BQ7Z309 247 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 COMTD1Q86VU5 262 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 DAW1Q8N136 415 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 RPRMLQ8N4K4 120 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 WDR31Q8NA23 367 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 ITFG1Q8TB96 612 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 FAM57AQ8TBR7 257 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 RXFP2Q8WXD0 754 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 APH1AQ96BI3 265 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 TBL1XR1Q9BZK7 514 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 OR51B5Q9H339 312 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 ELOVL6Q9H5J4 265 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 REEP1Q9H902 201 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 VAX2Q9UIW0 290 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 CES1P1Q9UKY3 287 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 OR51B2Q9Y5P1 312 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 NUP205Q92621 2012 aa0.74□□□□□ -2.29
SMC4-219ENST00000487747 SSH2Q76I76 1423 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 MROH7Q68CQ1 1323 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 A0A1W2PNM2 257 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 A0A1W2PRD5 423 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 IGLL5B9A064 214 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 ZBTB5O15062 677 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 ERLIN1O75477 346 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 UPK1BO75841 260 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 RGS6P49758 472 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 CLDN18P56856 261 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 KRTAP10-4P60372 401 aaPredicted RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 GRB2P62993 217 aaKnown RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 RPL18AQ02543 176 aaKnown RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 RAD51Q06609 339 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 MAPRE2Q15555 327 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 FBXL19-AS1Q494R0 122 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 TMPPEQ6ZT21 453 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 TRMT10CQ7L0Y3 403 aaKnown RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 LUZP2Q86TE4 346 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 PDPNQ86YL7 162 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 SLC30A8Q8IWU4 369 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 ZCCHC24Q8N2G6 241 aaKnown RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 OR1S1Q8NH92 325 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 ITLN2Q8WWU7 325 aaPredicted RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 RCN3Q96D15 328 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 C9orf72Q96LT7 481 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 DERL3Q96Q80 235 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 NAPGQ99747 312 aaPredicted RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 TMEM175Q9BSA9 504 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 FAM192AQ9GZU8 254 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 DEFB129Q9H1M3 183 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 AUNIPQ9H7T9 357 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 LYRM4Q9HD34 91 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 CCNB1IP1Q9NPC3 277 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 FBXO8Q9NRD0 319 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 MYEF2Q9P2K5 600 aaKnown RBP0.73□□□□□ -2.29
SMC4-219ENST00000487747 PPIL1Q9Y3C6 166 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 KMT2EQ8IZD2 1858 aa0.73□□□□□ -2.29
SMC4-219ENST00000487747 ELP1O95163 1332 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 A0A075B6Q4 140 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 A0A0G2JMP0 313 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 A0A0X1KG70 313 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 CCDC169A6NNP5 214 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 UPK1AO00322 258 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 MYL12BO14950 172 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 ENTPD6O75354 484 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 CTAG2O75638 210 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 IGHV3-53P01767 116 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 CATP04040 527 aaKnown RBP0.72□□□□□ -2.29
SMC4-219ENST00000487747 GSTM3P21266 225 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 CFHR2P36980 270 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 SLC1A2P43004 574 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 IRF8Q02556 426 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 LRRC74AQ0VAA2 488 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 GABRA6Q16445 453 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 C5orf64Q2M2E5 130 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 CLEC18BQ6UXF7 455 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 NDUFAF7Q7L592 441 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 PAGE2Q7Z2X7 111 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 BBS5Q8N3I7 341 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 C3orf22Q8N5N4 141 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 ZNF555Q8NEP9 628 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 YIPF6Q96EC8 236 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 SCGB3A2Q96PL1 93 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 API5Q9BZZ5 524 aaKnown RBP0.72□□□□□ -2.29
SMC4-219ENST00000487747 STMN4Q9H169 189 aaPredicted RBP0.72□□□□□ -2.29
SMC4-219ENST00000487747 OR2S2Q9NQN1 319 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 TMEM38BQ9NVV0 291 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms