RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 RPUSD1Q9UJJ7 312 aaKnown RBP13.1□□□□□ -0.31
GABPA-203ENST00000487266 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
GABPA-203ENST00000487266 FBN3Q75N90 2809 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 TENM1Q9UKZ4 2725 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 METTL15A6NJ78 407 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 SYNGR1O43759 233 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 NRASP01111 189 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 BAMBIQ13145 260 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 RBMS3Q6XE24 437 aaKnown RBP13.09□□□□□ -0.31
GABPA-203ENST00000487266 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 SLC36A1Q7Z2H8 476 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 TRMT10AQ8TBZ6 339 aaKnown RBP13.09□□□□□ -0.31
GABPA-203ENST00000487266 AQP3Q92482 292 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 RNFT2Q96EX2 444 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
GABPA-203ENST00000487266 IGKV1D-17A0A075B6S4 117 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 NKX6-3A6NJ46 265 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 HAX1O00165 279 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 NDUFB3O43676 98 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
GABPA-203ENST00000487266 CCL1P22362 96 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 HAAOP46952 286 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 MTNR1AP48039 350 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 TGM4P49221 684 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 ISL1P61371 349 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 DEFB112Q30KQ8 113 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 GPR157Q5UAW9 335 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 METTL11BQ5VVY1 283 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
GABPA-203ENST00000487266 NPRL2Q8WTW4 380 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
GABPA-203ENST00000487266 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
GABPA-203ENST00000487266 RFKQ969G6 155 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 ONECUT1Q9UBC0 465 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
GABPA-203ENST00000487266 GMPPBQ9Y5P6 360 aa13.08□□□□□ -0.32
GABPA-203ENST00000487266 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 A0A1B0GVI7 797 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 LOC107986453A0A1B0GWG9 222 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 PQLC2LA1A4F0 135 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 TMEM89A2RUT3 159 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 J3QRE1 110 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 SYT7O43581 403 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 PSG2P11465 335 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 GABRB1P18505 474 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 GABRA2P47869 451 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 CEBPDP49716 269 aaPredicted RBP13.07□□□□□ -0.32
GABPA-203ENST00000487266 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
GABPA-203ENST00000487266 TMED1Q13445 227 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 SLC9A3R2Q15599 337 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 ATPAF1Q5TC12 328 aaPredicted RBP13.07□□□□□ -0.32
GABPA-203ENST00000487266 Q6ZSR3 168 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 FAM220AQ7Z4H9 259 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 ENTHD1Q8IYW4 607 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
GABPA-203ENST00000487266 LHX4Q969G2 390 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 TMIGD2Q96BF3 282 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 TNFRSF19Q9NS68 423 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 SLC25A10Q9UBX3 287 aaPredicted RBP13.07□□□□□ -0.32
GABPA-203ENST00000487266 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
GABPA-203ENST00000487266 ANKRD61A6NGH8 418 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 J3QT63 122 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 DLGAP1O14490 977 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 SULT1C4O75897 302 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 BAG2O95816 211 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
GABPA-203ENST00000487266 LIPFP07098 398 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 PRTN3P24158 256 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 OR12D2P58182 307 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
GABPA-203ENST00000487266 IL13RA1P78552 427 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 ZNF91Q05481 1191 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 OCLNQ16625 522 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 LRRC10Q5BKY1 277 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 SLC25A30Q5SVS4 291 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 ANGPTL5Q86XS5 388 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 ZNRF1Q8ND25 227 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 LY6G5BQ8NDX9 201 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 DCTN5Q9BTE1 182 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 MAB21L2Q9Y586 359 aa13.06□□□□□ -0.32
GABPA-203ENST00000487266 FAM230AA0A1W2PPH8 454 aa13.05□□□□□ -0.32
GABPA-203ENST00000487266 DAPL1A0PJW8 107 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms