RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 LCN1P1Q5VSP4 162 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 KRT74Q7RTS7 529 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 ZNF679Q8IYX0 411 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 LINC01006Q8NI28 216 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 UTP4Q969X6 686 aaKnown RBP20.12■□□□□ 0.81
LIME1-206ENST00000487026 NRBF2Q96F24 287 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 CITED1Q99966 193 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 DPAGT1Q9H3H5 408 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 PIGLQ9Y2B2 252 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 MAB21L2Q9Y586 359 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 MITFO75030 526 aaPredicted RBP20.11■□□□□ 0.81
LIME1-206ENST00000487026 FBP1P09467 338 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 RPL15P61313 204 aaKnown RBP20.11■□□□□ 0.81
LIME1-206ENST00000487026 GUCA2AQ02747 115 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 ROM1Q03395 351 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 PLCXD3Q63HM9 321 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 OR5A2Q8NGI9 324 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 ZNF671Q8TAW3 534 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 BCAS4Q8TDM0 211 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 NPRL2Q8WTW4 380 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 ASB17Q8WXJ9 295 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 AQP3Q92482 292 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 DUS3LQ96G46 650 aaKnown RBP20.11■□□□□ 0.81
LIME1-206ENST00000487026 APOL4Q9BPW4 351 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 ZNRD1Q9P1U0 126 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 GTF2A1LQ9UNN4 478 aa20.11■□□□□ 0.81
LIME1-206ENST00000487026 CAB39Q9Y376 341 aaPredicted RBP20.11■□□□□ 0.81
LIME1-206ENST00000487026 MEIOCA2RUB1 952 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 ZNF254O75437 659 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 IGLV3-1P01715 115 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 RIDAP52758 137 aaKnown RBP20.1■□□□□ 0.81
LIME1-206ENST00000487026 CAV3P56539 151 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 HAGHLQ6PII5 290 aaPredicted RBP20.1■□□□□ 0.81
LIME1-206ENST00000487026 TMEM185AQ8NFB2 350 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 DNAJC9Q8WXX5 260 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 ZNF488Q96MN9 340 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 CNN2Q99439 309 aaKnown RBP20.1■□□□□ 0.81
LIME1-206ENST00000487026 NUFIP1Q9UHK0 495 aaKnown RBP20.1■□□□□ 0.81
LIME1-206ENST00000487026 ZNF222Q9UK12 451 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 TMEM14AQ9Y6G1 99 aa20.1■□□□□ 0.81
LIME1-206ENST00000487026 VWFP04275 2813 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 EPHA2P29317 976 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 DEFA6Q01524 100 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 ZNF829Q3KNS6 432 aaPredicted RBP20.09■□□□□ 0.81
LIME1-206ENST00000487026 GDPGP1Q6ZNW5 385 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 PLEKHG7Q6ZR37 379 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 C1orf122Q6ZSJ8 110 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 Q6ZSV7 163 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 MEPCEQ7L2J0 689 aaKnown RBP20.09■□□□□ 0.81
LIME1-206ENST00000487026 TCEANCQ8N8B7 351 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 OR5K1Q8NHB7 308 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 CADM1Q9BY67 442 aaKnown RBP20.09■□□□□ 0.81
LIME1-206ENST00000487026 ENPP5Q9UJA9 477 aa20.09■□□□□ 0.81
LIME1-206ENST00000487026 OR5B21A6NL26 309 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 M0R1W7 72 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 NRASP01111 189 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 TTRP02766 147 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 ATP6V1B1P15313 513 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 SAA4P35542 130 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 UBE2E1P51965 193 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 CXCR4P61073 352 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 ESRRGP62508 458 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 ZNF322Q6U7Q0 402 aaPredicted RBP20.08■□□□□ 0.81
LIME1-206ENST00000487026 ZSCAN4Q8NAM6 433 aaPredicted RBP20.08■□□□□ 0.81
LIME1-206ENST00000487026 LRTOMTQ8WZ04 291 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 METTL8Q9H825 291 aaKnown RBP20.08■□□□□ 0.81
LIME1-206ENST00000487026 KRT84Q9NSB2 600 aa20.08■□□□□ 0.81
LIME1-206ENST00000487026 H2AFY2Q9P0M6 372 aaPredicted RBP20.08■□□□□ 0.81
LIME1-206ENST00000487026 A6NIN4 97 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 SRSF10O75494 262 aaKnown RBP20.07■□□□□ 0.8
LIME1-206ENST00000487026 PAHP00439 452 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 CAPZA1P52907 286 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 ZNF684Q5T5D7 378 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 ACP7Q6ZNF0 438 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 SLC35F2Q8IXU6 374 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 FAM185AQ8N0U4 392 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 BATF2Q8N1L9 274 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 CD177Q8N6Q3 437 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 C17orf50Q8WW18 174 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 IL4I1Q96RQ9 567 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 GPR173Q9NS66 373 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 VPREB3Q9UKI3 123 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 WNK1Q9H4A3 2382 aa20.07■□□□□ 0.8
LIME1-206ENST00000487026 BTBD17A6NE02 478 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 RFPL4AA6NLU0 287 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 LOC110117498-PIK3R3F6TDL0 507 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 RFPL4AL1F8VTS6 287 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 H0YAE9 185 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 SYNGR1O43759 233 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 DHRS3O75911 302 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 PROK1P58294 105 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 EFNB1P98172 346 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 BLMHQ13867 455 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 ZBTB37Q5TC79 503 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 AADACL4Q5VUY2 407 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 DHRS7BQ6IAN0 325 aaPredicted RBP20.06■□□□□ 0.8
LIME1-206ENST00000487026 ASPHD2Q6ICH7 369 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 HCP5Q6MZN7 132 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 SDSLQ96GA7 329 aa20.06■□□□□ 0.8
LIME1-206ENST00000487026 ADGRL4Q9HBW9 690 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms