RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ZNF93P35789 620 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 CDKN1AP38936 164 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 HAAOP46952 286 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 SERPINB10P48595 397 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 SRP9P49458 86 aaKnown RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 ATP1B3P54709 279 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 MTCP1P56278 107 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 CCL8P80075 99 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 MPPED2Q15777 294 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 GLT8D1Q68CQ7 371 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 ZNF573Q86YE8 665 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 C11orf53Q8IXP5 236 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 Q8TCH9 128 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 ITLN1Q8WWA0 313 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 NRGNQ92686 78 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 SLC25A46Q96AG3 418 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 FOXRED1Q96CU9 486 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 CPNE2Q96FN4 548 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 NKX3-1Q99801 234 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-227ENST00000486806 PKIBQ9C010 78 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 DCSTAMPQ9H295 470 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 LIME1Q9H400 295 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 SAP30LQ9HAJ7 183 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 PMF1-BGLAPU3KQ54 211 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 PTPN13Q12923 2485 aa8.1□□□□□ -1.11
MCF2L-227ENST00000486806 ABCA4P78363 2273 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 SMIM30A4D0T7 59 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 IFITM5A6NNB3 132 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 J3QT63 122 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 SLC17A2O00624 439 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 HPXP02790 462 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 PAX1P15863 534 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 OR3A4PP47883 348 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 PSMD7P51665 324 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CAV3P56539 151 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 MXD1Q05195 221 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 IL24Q13007 206 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 RIN1Q13671 783 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 C1orf100Q5SVJ3 147 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 HAGHLQ6PII5 290 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 ANGPTL5Q86XS5 388 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 JAGN1Q8N5M9 183 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 SCCPDHQ8NBX0 429 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 OR4D6Q8NGJ1 314 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 OR5D18Q8NGL1 313 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 OR6M1Q8NGM8 313 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 DYNC2LI1Q8TCX1 351 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 AQP3Q92482 292 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 ERGIC1Q969X5 290 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 SLC25A28Q96A46 364 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 RFT1Q96AA3 541 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 DGCR14Q96DF8 476 aaKnown RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 C1orf147Q96MC9 270 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 VRK1Q99986 396 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 BARHL1Q9BZE3 327 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 EGLN1Q9GZT9 426 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CXorf56Q9H5V9 222 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CNTD2Q9H8S5 307 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 GCM1Q9NP62 436 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 ZNF701Q9NV72 531 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CCDC59Q9P031 241 aaKnown RBP8.09□□□□□ -1.11
MCF2L-227ENST00000486806 V9GY05 133 aa8.09□□□□□ -1.11
MCF2L-227ENST00000486806 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.12
MCF2L-227ENST00000486806 ROS1P08922 2347 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 HEATR1Q9H583 2144 aaKnown RBP8.08□□□□□ -1.12
MCF2L-227ENST00000486806 IGKV1-12A0A0C4DH73 117 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 IGHV3-64DA0A0J9YX35 117 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 CDIPTO14735 213 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 SYNGR1O43759 233 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 TMEM127O75204 238 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 RP2O75695 350 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 RHBDL1O75783 438 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 IGKV1D-12P01611 117 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 GRPP07492 148 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 HTR2CP28335 458 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 CFHR2P36980 270 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 PMELP40967 661 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 PTGFRP43088 359 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 POU3F4P49335 361 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 MRPS11P82912 194 aaKnown RBP8.08□□□□□ -1.12
MCF2L-227ENST00000486806 HNRNPA0Q13151 305 aaKnown RBP8.08□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF181Q2M3W8 571 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 ASCL4Q6XD76 172 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 C1QL2Q7Z5L3 287 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 MOGAT3Q86VF5 341 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 TGIF2LYQ8IUE0 185 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 SAXO1Q8IYX7 474 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 PNLDC1Q8NA58 520 aaKnown RBP8.08□□□□□ -1.12
MCF2L-227ENST00000486806 ZSCAN4Q8NAM6 433 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-227ENST00000486806 PXT1Q8NFP0 134 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 TNFAIP8L1Q8WVP5 186 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 NEU4Q8WWR8 484 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms