RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 OR8H2Q8N162 312 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 OR5A2Q8NGI9 324 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ITLN2Q8WWU7 325 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ELL3Q9HB65 397 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-207ENST00000486080 NDRG3Q9UGV2 375 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 RAB22AQ9UL26 194 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 IGKV1-12A0A0C4DH73 117 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 CDC14BO60729 498 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-207ENST00000486080 MPIG6BO95866 241 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 IGKV1D-12P01611 117 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 RAB6AP20340 208 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 PTBP1P26599 531 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL9A1-207ENST00000486080 CAPZA1P52907 286 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 PDZK1IP1Q13113 114 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 Q6ZR03 302 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 Q8N402 240 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 GDPD1Q8N9F7 314 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 PTX4Q96A99 478 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 CPNE2Q96FN4 548 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-207ENST00000486080 LRRC46Q96FV0 321 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 SYT3Q9BQG1 590 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 MSL2Q9HCI7 577 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 FBLN5Q9UBX5 448 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF462Q96JM2 2506 aa12.31□□□□□ -0.44
COL9A1-207ENST00000486080 MLNRO43193 412 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 CSF3P09919 207 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 UBBP0CG47 229 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 PTHLHP12272 177 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 SERPINA2P20848 420 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 HAAOP46952 286 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 PTH2RP49190 550 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 SORDQ00796 357 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM69Q5SWH9 247 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 STEAP3Q658P3 488 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 SLC25A26Q70HW3 274 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 OR10AD1Q8NGE0 317 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 OR8S1Q8NH09 359 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 GCDHQ92947 438 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 S100A13Q99584 98 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 ADAT1Q9BUB4 502 aaKnown RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 CCDC32Q9BV29 185 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 FLNCQ14315 2725 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 A0A0A6YYD4 124 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 XRCC3O43542 346 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 CLDN14O95500 239 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 HLA-DQB1P01920 261 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 IL7P13232 177 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NR4A2P43354 598 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 TAS2R20P59543 309 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 OR8G1Q15617 311 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 RNASE12Q5GAN4 147 aaKnown RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 PYHIN1Q6K0P9 492 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 ASCL4Q6XD76 172 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 WDR86Q86TI4 376 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 BATF2Q8N1L9 274 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF611Q8N823 705 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 NUP37Q8NFH4 326 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 MRPL37Q9BZE1 423 aaKnown RBP12.3□□□□□ -0.44
COL9A1-207ENST00000486080 LPAR5Q9H1C0 372 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
COL9A1-207ENST00000486080 TRAV18A0A075B6X5 111 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 WIPF3A6NGB9 483 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 OR5B21A6NL26 309 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 IGHV3-13P01766 116 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 KLF3P57682 345 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-207ENST00000486080 RPS23P62266 143 aaKnown RBP12.29□□□□□ -0.44
COL9A1-207ENST00000486080 GNG3P63215 75 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 DGCR2P98153 550 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 RSU1Q15404 277 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 BAIAP2L2Q6UXY1 529 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 LYSMD2Q8IV50 215 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 MICU1Q9BPX6 476 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM59Q9BXS4 323 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 ESRP2Q9H6T0 727 aaKnown RBP12.29□□□□□ -0.44
COL9A1-207ENST00000486080 CA10Q9NS85 328 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms