RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 BRD3OSQ6XYD6 125 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 TMEM91Q6ZNR0 172 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 CATSPERDQ86XM0 798 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 GJC3Q8NFK1 279 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 IL17RDQ8NFM7 739 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 OR13C5Q8NGS8 318 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 NDNFQ8TB73 568 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 RGP1Q92546 391 aaPredicted RBP8.2□□□□□ -1.1
SND1-213ENST00000486037 GHSRQ92847 366 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 PPP1R14AQ96A00 147 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 SMIM19Q96E16 107 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 C4orf45Q96LM5 186 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 WWC2-AS2Q96NR7 200 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 PDCD1LG2Q9BQ51 273 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 FRRS1LQ9P0K9 344 aa8.2□□□□□ -1.1
SND1-213ENST00000486037 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
SND1-213ENST00000486037 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 TRAV40A0A0B4J280 105 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 GABRPO00591 440 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 FOXH1O75593 365 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 OPN1MWP04001 364 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 OPN1MW2P0DN77 364 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 OPN1MW3P0DN78 364 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 ANOS1P23352 680 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 RPS11P62280 158 aaKnown RBP eCLIP8.19□□□□□ -1.1
SND1-213ENST00000486037 PSG4Q00888 419 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 RSPO1Q2MKA7 263 aaPredicted RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 TIMM50Q3ZCQ8 353 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 ZNF774Q6NX45 483 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 GDPGP1Q6ZNW5 385 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 SLC16A14Q7RTX9 510 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 SYT9Q86SS6 491 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 ABHD4Q8TB40 342 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 HAVCR2Q8TDQ0 301 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 RAB1CQ92928 201 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 DCUN1D5Q9BTE7 237 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 WNT5BQ9H1J7 359 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 EXOSC4Q9NPD3 245 aaKnown RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 TXNL4BQ9NX01 149 aaKnown RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 FAM206AQ9NX38 181 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 GAR1Q9NY12 217 aaKnown RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 SSR3Q9UNL2 185 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 SLC22A13Q9Y226 551 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 POLR3KQ9Y2Y1 108 aaPredicted RBP8.19□□□□□ -1.1
SND1-213ENST00000486037 R4GMQ9 66 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
SND1-213ENST00000486037 OR6C6A6NF89 314 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 LOC110117498-PIK3R3F6TDL0 507 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 SLC22A1O15245 554 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 DOK2O60496 412 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 SC5DO75845 299 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 ZFPL1O95159 310 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 FARS2O95363 451 aaKnown RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 HLA-DPB1P04440 258 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 DBHP09172 617 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 CD79AP11912 226 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 FGF9P31371 208 aaPredicted RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 DCTDP32321 178 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 CCR9P51686 369 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 PRKXP51817 358 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 PSMA6P60900 246 aaKnown RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 COL10A1Q03692 680 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 PAX8Q06710 450 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 SCRN3Q0VDG4 424 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 TAF13Q15543 124 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 TRAM1Q15629 374 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 TMEM255AQ5JRV8 349 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 PAQR4Q8N4S7 273 aaPredicted RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 OR10AC1Q8NH08 325 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 SLC7A6Q92536 515 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 CCL17Q92583 94 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 KCNJ15Q99712 375 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 MRI1Q9BV20 369 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 PPIL3Q9H2H8 161 aaKnown RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 MOV10Q9HCE1 1003 aaKnown RBP8.18□□□□□ -1.1
SND1-213ENST00000486037 NECAP2Q9NVZ3 263 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 OR52A1Q9UKL2 312 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 TIMM10BQ9Y5J6 103 aa8.18□□□□□ -1.1
SND1-213ENST00000486037 DOCK11Q5JSL3 2073 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 TMEM269A0A1B0GVZ9 245 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 SGCEO43556 437 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 TTRP02766 147 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 MELTFP08582 738 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 FAM157BP0CG42 384 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 SLC2A1P11166 492 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 ZNF182P17025 639 aaPredicted RBP8.17□□□□□ -1.1
SND1-213ENST00000486037 GALP22466 123 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 HSD11B1P28845 292 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 OTX1P32242 354 aaPredicted RBP8.17□□□□□ -1.1
SND1-213ENST00000486037 SERPINB10P48595 397 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 CX3CR1P49238 355 aa8.17□□□□□ -1.1
SND1-213ENST00000486037 ZNF121P58317 390 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms