RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	ZCCHC4	Q9H5U6	513 aa		11.65	□□□□□ -0.54
SCAP-211	ENST00000485967	NARFL	Q9H6Q4	476 aa		11.65	□□□□□ -0.54
SCAP-211	ENST00000485967	ISYNA1	Q9NPH2	558 aa		11.65	□□□□□ -0.54
SCAP-211	ENST00000485967	DCAF16	Q9NXF7	216 aa		11.65	□□□□□ -0.54
SCAP-211	ENST00000485967	WIPI2	Q9Y4P8	454 aa		11.65	□□□□□ -0.54
SCAP-211	ENST00000485967	FBN1	P35555	2871 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	PPIAL4E	A0A075B759	164 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	PPIAL4D	F5H284	164 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	HAX1	O00165	279 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	MAGEB3	O15480	346 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF205	O95201	554 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	LY6G6D	O95868	133 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	PPIAL4F	P0DN26	164 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	RBMX	P38159	391 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ATP1B3	P54709	279 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	EMX1	Q04741	257 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	LOXL1	Q08397	574 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	HNRNPA0	Q13151	305 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	TBCE	Q15813	527 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	KCTD21	Q4G0X4	260 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	FAM76B	Q5HYJ3	339 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	HAGHL	Q6PII5	290 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF367	Q7RTV3	350 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF573	Q86YE8	665 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	C11orf53	Q8IXP5	236 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	SPART	Q8N0X7	666 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	MS4A15	Q8N5U1	240 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	SCCPDH	Q8NBX0	429 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	OR13C9	Q8NGT0	318 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF671	Q8TAW3	534 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	LRRC29	Q8WV35	223 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	RGP1	Q92546	391 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	TMEM106A	Q96A25	262 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	MGLL	Q99685	303 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	GAL3ST1	Q99999	423 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	FGF23	Q9GZV9	251 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	OR51I2	Q9H344	312 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	ACOT13	Q9NPJ3	140 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	PCDHB10	Q9UN67	800 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	LRCH1	Q9Y2L9	728 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	PPIAL4A	Q9Y536	164 aa		11.64	□□□□□ -0.55
SCAP-211	ENST00000485967	IGHV4-61	A0A0C4DH41	118 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	PQLC2L	A1A4F0	135 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	TNFAIP8	O95379	198 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	HAAO	P46952	286 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	BTG1	P62324	171 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	MLLT11	Q13015	90 aa	Predicted RBP	11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	GPR50	Q13585	617 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967		Q499Y3	187 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	LIPK	Q5VXJ0	399 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF773	Q6PK81	442 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	PARP16	Q8N5Y8	322 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	DNAAF1	Q8NEP3	725 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	DEFB108B	Q8NET1	73 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	OR13C5	Q8NGS8	318 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	PGLYRP3	Q96LB9	341 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	TMED9	Q9BVK6	235 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	TLNRD1	Q9H1K6	362 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	METTL17	Q9H7H0	456 aa	Predicted RBP	11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	CKLF	Q9UBR5	152 aa		11.63	□□□□□ -0.55
SCAP-211	ENST00000485967	TRBV5-5	A0A0J9YX44	114 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	ZNF879	B4DU55	563 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	IGHV2-70	P01814	119 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	HCK	P08631	526 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	RAB3A	P20336	220 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	AZGP1	P25311	298 aa	Known RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	MAPK3	P27361	379 aa	Predicted RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	MDH2	P40926	338 aa	Known RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	RBP2	P50120	134 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	MTCP1	P56278	107 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	GMFB	P60983	142 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	PPP3R1	P63098	170 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	TPBG	Q13641	420 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	DOC2B	Q14184	412 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	ZMYND11	Q15326	602 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	KCNJ8	Q15842	424 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	ARMCX4	Q5H9R4	360 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	FAM201A	Q5SY85	155 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	WDR82	Q6UXN9	313 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	LHFPL2	Q6ZUX7	228 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	LRRC28	Q86X40	367 aa	Predicted RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	PRIMA1	Q86XR5	153 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	ANGPTL5	Q86XS5	388 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	MUC20	Q8N307	709 aa	Predicted RBP	11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	PIP4P2	Q8N4L2	257 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	SPIC	Q8N5J4	248 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	OR10Z1	Q8NGY1	313 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	CLDND2	Q8NHS1	167 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	AQP3	Q92482	292 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	FCGR1B	Q92637	280 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	THRSP	Q92748	146 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	SPSB1	Q96BD6	273 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	OPALIN	Q96PE5	141 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	TAS2R4	Q9NYW5	299 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	POLDIP2	Q9Y2S7	368 aa		11.62	□□□□□ -0.55
SCAP-211	ENST00000485967	TRAV38-1	A0A0B4J264	116 aa		11.61	□□□□□ -0.55
SCAP-211	ENST00000485967	IGKV1-9	A0A0C4DH69	117 aa		11.61	□□□□□ -0.55
SCAP-211	ENST00000485967		A0A1W2PPK0	400 aa		11.61	□□□□□ -0.55
SCAP-211	ENST00000485967	C3orf80	F5H4A9	247 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms