RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 EEF1B2P24534 225 aaKnown RBP9.93□□□□□ -0.82
HPS4-214ENST00000485842 HAAOP46952 286 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 TAS2R43P59537 309 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 DOC2BQ14184 412 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 CNN3Q15417 329 aaKnown RBP9.93□□□□□ -0.82
HPS4-214ENST00000485842 UBE2V2Q15819 145 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 ZNF404Q494X3 552 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 RBM48Q5RL73 367 aaKnown RBP9.93□□□□□ -0.82
HPS4-214ENST00000485842 HAGHLQ6PII5 290 aaPredicted RBP9.93□□□□□ -0.82
HPS4-214ENST00000485842 NANOGP1Q8N7R0 232 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 OR13C5Q8NGS8 318 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 RPS4Y2Q8TD47 263 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 MND1Q9BWT6 205 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 CDCA4Q9BXL8 241 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 OR51I2Q9H344 312 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 DUSP21Q9H596 190 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 TMEM165Q9HC07 324 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 BLOC1S6Q9UL45 172 aa9.93□□□□□ -0.82
HPS4-214ENST00000485842 OOEPA6NGQ2 149 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 OGG1O15527 345 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 AKR7A2O43488 359 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 DENRO43583 198 aaKnown RBP9.92□□□□□ -0.82
HPS4-214ENST00000485842 PLATP00750 562 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
HPS4-214ENST00000485842 ATF1P18846 271 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 AZGP1P25311 298 aaKnown RBP9.92□□□□□ -0.82
HPS4-214ENST00000485842 MED22Q15528 200 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 DMKNQ6E0U4 476 aaPredicted RBP9.92□□□□□ -0.82
HPS4-214ENST00000485842 FAM166AQ6J272 317 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 ZNF573Q86YE8 665 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 GPR148Q8TDV2 347 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 AQP3Q92482 292 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 SEH1LQ96EE3 360 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 BORCS8Q96FH0 119 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 TECTBQ96PL2 329 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 OR5M11Q96RB7 305 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
HPS4-214ENST00000485842 DNAJB11Q9UBS4 358 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 ZNF281Q9Y2X9 895 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 MALRD1Q5VYJ5 2156 aa9.92□□□□□ -0.82
HPS4-214ENST00000485842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.91□□□□□ -0.823e-7■■■□□ 17.4
HPS4-214ENST00000485842 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 IGKV1-9A0A0C4DH69 117 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 A8MV72 311 aaPredicted RBP9.91□□□□□ -0.82
HPS4-214ENST00000485842 B4DSR2 109 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 F5H0A9 414 aaPredicted RBP9.91□□□□□ -0.82
HPS4-214ENST00000485842 J3QT63 122 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 SYNGR1O43759 233 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 INMTO95050 263 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 LHBP01229 141 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 GYPAP02724 150 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 CD2P06729 351 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 CELP19835 753 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 MAP2K4P45985 399 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 POU3F4P49335 361 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 FUT6P51993 359 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 SEC61A1P61619 476 aaKnown RBP9.91□□□□□ -0.82
HPS4-214ENST00000485842 IRF3Q14653 427 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 KCNJ8Q15842 424 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 FAM76BQ5HYJ3 339 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 RNLSQ5VYX0 342 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 LYPD2Q6UXB3 125 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 DCDC5Q6ZRR9 648 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 UTS2BQ765I0 119 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 PRSS48Q7RTY5 328 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 GLCCI1Q86VQ1 547 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 ANGPTL5Q86XS5 388 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 FAM90A1Q86YD7 464 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 BATF2Q8N1L9 274 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 OR10Z1Q8NGY1 313 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 OR51F2Q8NH61 342 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 ZNF671Q8TAW3 534 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 GHSRQ92847 366 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 NEIL1Q96FI4 390 aaPredicted RBP9.91□□□□□ -0.82
HPS4-214ENST00000485842 C1orf159Q96HA4 380 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 ZNF488Q96MN9 340 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 WDR13Q9H1Z4 485 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 RASSF4Q9H2L5 321 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 ZCCHC4Q9H5U6 513 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 SNTG1Q9NSN8 517 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 MIOXQ9UGB7 285 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 KCNS2Q9ULS6 477 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 LSM2Q9Y333 95 aaKnown RBP9.91□□□□□ -0.82
HPS4-214ENST00000485842 MTORP42345 2549 aa9.91□□□□□ -0.82
HPS4-214ENST00000485842 INAFM1C9JVW0 142 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.9□□□□□ -0.82
HPS4-214ENST00000485842 ADAM20O43506 726 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 PLPP2O43688 288 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 FSTL3O95633 263 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 MSMBP08118 114 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 HCKP08631 526 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 HSMCR30P0CW71 290 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 PRKACBP22694 351 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 GLRA1P23415 457 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 CFHR2P36980 270 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms