RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 TM4SF18Q96CE8 201 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 RNF183Q96D59 192 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ZBED6CLQ96FA7 236 aaPredicted RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MED8Q96G25 268 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 TIMD4Q96H15 378 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM19Q96HH6 336 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ST6GAL2Q96JF0 529 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 POM121L2Q96KW2 1035 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF582Q96NG8 517 aaPredicted RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 THAP7Q9BT49 309 aaPredicted RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 TSSK6Q9BXA6 273 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 RSPO3Q9BXY4 272 aaPredicted RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MS4A8Q9BY19 250 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ARL6Q9H0F7 186 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ZBP1Q9H171 429 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 POLR2J3Q9H1A7 115 aaKnown RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MMP28Q9H239 520 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ARV1Q9H2C2 271 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MIXL1Q9H2W2 232 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 DPAGT1Q9H3H5 408 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 SAP30LQ9HAJ7 183 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM27Q9HBJ8 222 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 AMBNQ9NP70 447 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MIEF1Q9NQG6 463 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 SPANXA1Q9NS26 97 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 COA4Q9NYJ1 87 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 IL36AQ9UHA7 158 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 MUTYHQ9UIF7 546 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF221Q9UK13 617 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 DKKL1Q9UK85 242 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ELF5Q9UKW6 265 aaPredicted RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 SSR3Q9UNL2 185 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 POLDIP2Q9Y2S7 368 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 EXOSC1Q9Y3B2 195 aaKnown RBP3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 RNF115Q9Y4L5 304 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 HSPB11Q9Y547 144 aa3.5□□□□□ -1.85
PRPF38B-205ENST00000485810 ALPK3Q96L96 1907 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SRCAPQ6ZRS2 3230 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TRAV18A0A075B6X5 111 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 A0A0A6YYD5 115 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 MEIOCA2RUB1 952 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 LINC00473A8K010 186 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 HSPB2A8KAH6 182 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C5orf58C9J3I9 102 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 HMGN4O00479 90 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PLPP1O14494 284 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PLPP3O14495 311 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PLPP2O43688 288 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CHST1O43916 411 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RAD1O60671 282 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 KRT33AO76009 404 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CNIH1O95406 144 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TSPAN13O95857 204 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 IFNGP01579 166 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 IFI6P09912 130 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR10J4P0C629 311 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CISD3P0C7P0 127 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CT45A8P0DMV1 189 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CT45A9P0DMV2 189 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ACP2P11117 423 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 NDUFB7P17568 137 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TNFRSF1BP20333 461 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 F2RP25116 425 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PAX6P26367 422 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 GDF1P27539 372 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 S100GP29377 79 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 IFNGR2P38484 337 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OPRD1P41143 372 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TSFMP43897 325 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 VEGFCP49767 419 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RAB7AP51149 207 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM50BP56557 158 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 WNT4P56705 351 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 NUTF2P61970 127 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PPP3R1P63098 170 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZP4Q12836 540 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 MYBPHQ13203 477 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CDK10Q15131 360 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 HSPB2Q16082 182 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SNAI3Q3KNW1 292 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF528Q3MIS6 628 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SYT14P1Q58G82 188 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CT45A2Q5DJT8 189 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TIMM23BQ5SRD1 257 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ATAD3CQ5T2N8 411 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RSBN1Q5VWQ0 802 aaPredicted RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM215Q68D42 235 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF730Q6ZMV8 503 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF517Q6ZMY9 492 aaPredicted RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RASSF6Q6ZTQ3 369 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 Q7L0L9 218 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC36A1Q7Z2H8 476 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C6orf120Q7Z4R8 191 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C1QL2Q7Z5L3 287 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C17orf64Q86WR6 236 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF547Q8IVP9 402 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SKA3Q8IX90 412 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR6V1Q8N148 313 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM109AQ8N4B1 249 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ARIH2OSQ8N7S6 290 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms