RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 SPICQ8N5J4 248 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 LY6G5BQ8NDX9 201 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 CCDC54Q8NEL0 328 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 DEFB108BQ8NET1 73 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 OR5A2Q8NGI9 324 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 OR51F2Q8NH61 342 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 FAM81AQ8TBF8 368 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 SPRYD4Q8WW59 207 aaPredicted RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 TAF15Q92804 592 aaKnown RBP eCLIP4.75□□□□□ -1.65
CUX1-208ENST00000485792 OTULINQ96BN8 352 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 C12orf43Q96C57 262 aaKnown RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 C10orf35Q96D05 121 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 LGALS12Q96DT0 336 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 PELI1Q96FA3 418 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 PGAM5Q96HS1 289 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 C1orf147Q96MC9 270 aaPredicted RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 ADAT1Q9BUB4 502 aaKnown RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 DNTTIP1Q9H147 329 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 OR51I2Q9H344 312 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 DCLRE1BQ9H816 532 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 LPAR2Q9HBW0 351 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 MMP26Q9NRE1 261 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 PLCXD1Q9NUJ7 323 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 HIF1ANQ9NWT6 349 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 SMPD3Q9NY59 655 aaPredicted RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 H2AFY2Q9P0M6 372 aaPredicted RBP4.75□□□□□ -1.65
CUX1-208ENST00000485792 RNF7Q9UBF6 113 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 MIOXQ9UGB7 285 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 ZNF222Q9UK12 451 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 OR52A1Q9UKL2 312 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 KCNS2Q9ULS6 477 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 SLC22A13Q9Y226 551 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 MYRFQ9Y2G1 1151 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 PPIAL4AQ9Y536 164 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 PCDHGB1Q9Y5G3 927 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 INSIG2Q9Y5U4 225 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 SNX5Q9Y5X3 404 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 HSPE1-MOB4S4R3N1 261 aa4.75□□□□□ -1.65
CUX1-208ENST00000485792 IGKV1-27A0A075B6S5 117 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 PQLC2LA1A4F0 135 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 LRRC30A6NM36 301 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ANKRD30BLA7E2S9 258 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 H0YAE9 185 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 LGALS8O00214 317 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 TPD52L2O43399 206 aaKnown RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 TBX1O43435 398 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 FOXH1O75593 365 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 MT-ND2P03891 347 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 MMP9P14780 707 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ADRA2CP18825 462 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 PCMT1P22061 227 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 CD80P33681 288 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 GDNFP39905 211 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 NPY4RP50391 375 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 OR12D2P58182 307 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ACTC1P68032 377 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ACTA1P68133 377 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 IL5RAQ01344 420 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ZNF91Q05481 1191 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 MZT1Q08AG7 82 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 RIPPLY1Q0D2K3 151 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 PRDX4Q13162 271 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 IL18R1Q13478 541 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 GALEQ14376 348 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 WDR25Q64LD2 544 aaPredicted RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 STUMQ69YW2 141 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ZNF788Q6ZQV5 615 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 C9orf139Q6ZV77 190 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 UTS2BQ765I0 119 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 DOK3Q7L591 496 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 C1QL2Q7Z5L3 287 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 PEG10Q86TG7 708 aaKnown RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 GLCCI1Q86VQ1 547 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 FTMTQ8N4E7 242 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 KLHL36Q8N4N3 616 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ACBD7Q8N6N7 88 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 SCCPDHQ8NBX0 429 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 OR51A4Q8NGJ6 313 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 OR2G2Q8NGZ5 317 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 OR51E1Q8TCB6 317 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 AQP3Q92482 292 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 TFAP2CQ92754 450 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 RNFT2Q96EX2 444 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 NEIL1Q96FI4 390 aaPredicted RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 TBX5Q99593 518 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 NKX3-1Q99801 234 aaPredicted RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 FN3KRPQ9HA64 309 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 HES4Q9HCC6 221 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ESM1Q9NQ30 184 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 TRIM36Q9NQ86 728 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 GPR84Q9NQS5 396 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 INPP5EQ9NRR6 644 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 AP5S1Q9NUS5 200 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ACOXLQ9NUZ1 547 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 FKBP14Q9NWM8 211 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 PAK1IP1Q9NWT1 392 aaPredicted RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 ERVK13-1Q9NX77 482 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms