RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ABCB9Q9NP78 766 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 SF3B6Q9Y3B4 125 aaKnown RBP10.62□□□□□ -0.71
HDAC6-227ENST00000485102 RRP15Q9Y3B9 282 aaKnown RBP10.62□□□□□ -0.71
HDAC6-227ENST00000485102 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 ANXA2P2A6NMY6 339 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 SIGLEC5O15389 551 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 ACAA1P09110 424 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-227ENST00000485102 SPARCP09486 303 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 PRKACGP22612 351 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 GSK3AP49840 483 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 CDK5Q00535 292 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 KLRD1Q13241 179 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 IKZF1Q13422 519 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 BLMHQ13867 455 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 DGUOKQ16854 277 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 LINC01590Q5TEZ4 76 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 HCP5Q6MZN7 132 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF511Q8NB15 262 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 OR51L1Q8NGJ5 315 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 OR5D13Q8NGL4 314 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 ITFG2Q969R8 447 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 GAFA1Q96PS6 74 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 SSX3Q99909 188 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 EGLN3Q9H6Z9 239 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 CMC2Q9NRP2 79 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-227ENST00000485102 SLC25A10Q9UBX3 287 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-227ENST00000485102 RHBDD3Q9Y3P4 386 aa10.61□□□□□ -0.71
HDAC6-227ENST00000485102 TRBV23-1A0A0A0MS06 115 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 NKX6-3A6NJ46 265 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 H3BUX3 64 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 EI24O14681 340 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 PIN1P1O15428 100 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 TBX1O43435 398 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 CST4P01036 141 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 ANXA2P07355 339 aaKnown RBP10.6□□□□□ -0.71
HDAC6-227ENST00000485102 SELLP14151 372 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 SPI1P17947 270 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 DCTDP32321 178 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 GNALP38405 381 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 CX3CR1P49238 355 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 DLX1P56177 255 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 GINS1Q14691 196 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 PTGES3Q15185 160 aaKnown RBP10.6□□□□□ -0.71
HDAC6-227ENST00000485102 SETD9Q8NE22 299 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 OR5T2Q8NGG2 359 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 OR2T6Q8NHC8 308 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 OR5P3Q8WZ94 311 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 APOL4Q9BPW4 351 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 RTL8AQ9BWD3 113 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
HDAC6-227ENST00000485102 CDCA4Q9BXL8 241 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 WDR13Q9H1Z4 485 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 PPP1R3EQ9H7J1 279 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 H2AFY2Q9P0M6 372 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF319Q9P2F9 582 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 DNAJB11Q9UBS4 358 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
HDAC6-227ENST00000485102 A0A1W2PRD5 423 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 A0A1W2PRF3 423 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 A0A1W2PRM7 423 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 MEGF11A6BM72 1044 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 ZAR1LA6NP61 321 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 PRR23D1E9PI22 279 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 PRODHO43272 600 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 SOX14O95416 240 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 PRR23D2P0DMB1 279 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OPRL1P41146 370 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF121P58317 390 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 TMED1Q13445 227 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 IL18R1Q13478 541 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 CRMP1Q14194 572 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 FAM189A2Q15884 450 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 SNAPC1Q16533 368 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 LRRC75BQ2VPJ9 315 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 SLC35D3Q5M8T2 416 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 LCN1P1Q5VSP4 162 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 MEDAGQ5VYS4 303 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 PNKDQ8N490 385 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 KLHDC1Q8N7A1 406 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OR51G2Q8NGK0 314 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OR8J1Q8NGP2 316 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 H1FXQ92522 213 aaKnown RBP10.59□□□□□ -0.71
HDAC6-227ENST00000485102 RFKQ969G6 155 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 Q96MT0 163 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 ABHD6Q9BV23 337 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 OR10A2Q9H208 303 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF391Q9UJN7 358 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
HDAC6-227ENST00000485102 LRP12Q9Y561 859 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms