RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 OR4K3Q96R72 315 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 ZNF251Q9BRH9 671 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 TMED9Q9BVK6 235 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 C12orf10Q9HB07 376 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 PARVGQ9HBI0 331 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 IFT46Q9NQC8 304 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 PSG11Q9UQ72 335 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 SNX24Q9Y343 169 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 PPIL1Q9Y3C6 166 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 PUS1Q9Y606 427 aaKnown RBP eCLIP2.97□□□□□ -1.93
VPS13A-211ENST00000484581 USH1CQ9Y6N9 552 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 NUP214P35658 2090 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-211ENST00000484581 ADAMTS9Q9P2N4 1935 aa2.97□□□□□ -1.93
VPS13A-211ENST00000484581 DOCK8Q8NF50 2099 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 A0A096LNJ9 63 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 A0A1B0GX12 115 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 A0A1W2PNU3 283 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 KLLNB2CW77 178 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 M0QXV9 152 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 BPY2O14599 106 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 RCBTB2O95199 551 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 TNFAIP8O95379 198 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 IGKV1D-16P01601 117 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 MT-ND4P03905 459 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 GTF2H1P32780 548 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 RPA3P35244 121 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 PSMB2P49721 201 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 XKP51811 444 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 RAB38P57729 211 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 CD164Q04900 197 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 CKAP4Q07065 602 aaKnown RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 LOXL1Q08397 574 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 TRAM1Q15629 374 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 UBE2SQ16763 222 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 SMUG1Q53HV7 270 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 MFSD14CQ5VZR4 134 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 SLC16A13Q7RTY0 426 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 MDP1Q86V88 176 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 CRLF3Q8IUI8 442 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 WDFY1Q8IWB7 410 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 DRAM1Q8N682 238 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF433Q8N7K0 673 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ACBD4Q8NC06 268 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 NECAP1Q8NC96 275 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 SFXN5Q8TD22 340 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 PHF10Q8WUB8 498 aaKnown RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 GHSRQ92847 366 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 FLYWCH2Q96CP2 140 aaKnown RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF514Q96K75 400 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF488Q96MN9 340 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ZIM3Q96PE6 472 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF382Q96SR6 550 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 C12orf4Q9NQ89 552 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 DNAJC27Q9NZQ0 273 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 NEU3Q9UQ49 428 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 SLC22A14Q9Y267 594 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 WSB1Q9Y6I7 421 aa2.96□□□□□ -1.94
VPS13A-211ENST00000484581 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 KIR2DS1A0A191URI9 304 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 SMLR1H3BR10 107 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 M0R1X1 148 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 SULT1C2O00338 296 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ITGB1BP1O14713 200 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 CHST10O43529 356 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 NDUFS5O43920 106 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 IGHV3-11P01762 117 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 OCMP0CE72 109 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF823P16415 610 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 HLA-GP17693 338 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 PRSS3P35030 304 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 PRKCDQ05655 676 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 MADCAM1Q13477 382 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 CEACAM16Q2WEN9 425 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 TMEM249Q2WGJ8 235 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 TSPO2Q5TGU0 170 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 UGT2A3Q6UWM9 527 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 NTM-AS1Q6ZSK4 140 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 MKXQ8IYA7 352 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ZCCHC24Q8N2G6 241 aaKnown RBP2.95□□□□□ -1.94
VPS13A-211ENST00000484581 OR5W2Q8NH69 310 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 OR1L1Q8NH94 360 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 DDI1Q8WTU0 396 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 RNF138Q8WVD3 245 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ZMYND19Q96E35 227 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-211ENST00000484581 SNF8Q96H20 258 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF414Q96IQ9 312 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ALS2CR12Q96Q35 445 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 OR2M4Q96R27 311 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 HBEGFQ99075 208 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 RSG1Q9BU20 258 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 NXF2Q9GZY0 626 aaKnown RBP2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ABCB9Q9NP78 766 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 ZNRD1Q9P1U0 126 aa2.95□□□□□ -1.94
VPS13A-211ENST00000484581 NPHP4O75161 1426 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CDC42BPBQ9Y5S2 1711 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 IGKV6D-21A0A0A0MT36 114 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 IGHV3-72A0A0B4J1Y9 119 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms