RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PMELP40967 661 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 CCR9P51686 369 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 GBX2P52951 348 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 OR12D2P58182 307 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 LMO4P61968 165 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 BTG1P62324 171 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 MPPED2Q15777 294 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 KCNJ8Q15842 424 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 SMN1Q16637 294 aaKnown RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 CEACAM21Q3KPI0 293 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 PRAMEF6Q5VXH4 476 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 FAM166AQ6J272 317 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 TMPRSS11AQ6ZMR5 421 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 Q6ZSR3 168 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 KCTD8Q6ZWB6 473 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 MOB3CQ70IA8 216 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ZDHHC23Q8IYP9 409 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 OR5A2Q8NGI9 324 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 OR14K1Q8NGZ2 314 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 CNIH3Q8TBE1 160 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 NRG4Q8WWG1 115 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 OR5P3Q8WZ94 311 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 MSI2Q96DH6 328 aaKnown RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 TMEM80Q96HE8 168 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 C4orf36Q96KX1 117 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 SOX7Q9BT81 388 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ALG8Q9BVK2 526 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 TRIM36Q9NQ86 728 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 PLCXD1Q9NUJ7 323 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ACOXLQ9NUZ1 547 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 C1orf123Q9NWV4 160 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 KCNS2Q9ULS6 477 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 PIGLQ9Y2B2 252 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 EXOSC1Q9Y3B2 195 aaKnown RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 V9GYS6 101 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ANKRD17O75179 2603 aaKnown RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 hCG_1807616A0A1W2PRN6 198 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 WNT9BO14905 357 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 NDUFA2O43678 99 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 LMX1BO60663 402 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 ATP6V1G2O95670 118 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 NRASP01111 189 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 IGHV2-70P01814 119 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 ISG15P05161 165 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CCDC159P0C7I6 412 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CCL1P22362 96 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 HSPA13P48723 471 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 GNG3P63215 75 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 ALKBH1Q13686 389 aaKnown RBP7.47□□□□□ -1.21
COL8A1-207ENST00000483969 FAM76BQ5HYJ3 339 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CLVS2Q5SYC1 327 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 C6orf52Q5T4I8 152 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 PRSS35Q8N3Z0 413 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 BPIFB6Q8NFQ5 453 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 OR1M1Q8NGA1 313 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 OR2G2Q8NGZ5 317 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 OR51F2Q8NH61 342 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 ZNF671Q8TAW3 534 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 GGHQ92820 318 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 C10orf35Q96D05 121 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 PLEKHA1Q9HB21 404 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 PATZ1Q9HBE1 687 aaKnown RBP7.47□□□□□ -1.21
COL8A1-207ENST00000483969 TMEM165Q9HC07 324 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 DCAF16Q9NXF7 216 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 SCN3BQ9NY72 215 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 UBAP1Q9NZ09 502 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CNOT2Q9NZN8 540 aaKnown RBP7.47□□□□□ -1.21
COL8A1-207ENST00000483969 MIOXQ9UGB7 285 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 DIMT1Q9UNQ2 313 aaKnown RBP7.47□□□□□ -1.21
COL8A1-207ENST00000483969 SLC7A11Q9UPY5 501 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CAB39Q9Y376 341 aaPredicted RBP7.47□□□□□ -1.21
COL8A1-207ENST00000483969 CADP27708 2225 aa7.47□□□□□ -1.21
COL8A1-207ENST00000483969 TRAV38-1A0A0B4J264 116 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 TRAV20A0A0B4J274 112 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 OR5B21A6NL26 309 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 ZNF732B4DXR9 585 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 LGALS8O00214 317 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 CDIPTO14735 213 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 FOXH1O75593 365 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 IGHV2-5P01817 119 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 MSMBP08118 114 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 GNAO1P09471 354 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 LIMS3P0CW19 117 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 LIMS4P0CW20 117 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 PIPP12273 146 aaPredicted RBP7.46□□□□□ -1.22
COL8A1-207ENST00000483969 FAHP16930 419 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 IL2RGP31785 369 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 CFHR2P36980 270 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 TGM4P49221 684 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 DVL1P1P54792 670 aaPredicted RBP7.46□□□□□ -1.22
COL8A1-207ENST00000483969 AQP4P55087 323 aa7.46□□□□□ -1.22
COL8A1-207ENST00000483969 ST3GAL4Q11206 333 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms