RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CLEC2DQ9UHP7 191 aa13.61□□□□□ -0.23
COL2A1-206ENST00000483376 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
COL2A1-206ENST00000483376 TRBV2A0A0J9YWF9 115 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 INAFM1C9JVW0 142 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-206ENST00000483376 PLPP2O43688 288 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 NOS1APO75052 506 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-206ENST00000483376 CRLF1O75462 422 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 MT-ND2P03891 347 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 CD1AP06126 327 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 CDK1P06493 297 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 FUT6P51993 359 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 TAS2R43P59537 309 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 SLC35A2P78381 396 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 CNN3Q15417 329 aaKnown RBP13.6□□□□□ -0.23
COL2A1-206ENST00000483376 UBE2V2Q15819 145 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 KCTD8Q6ZWB6 473 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 AHSA2Q719I0 299 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 NLRC3Q7RTR2 1065 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 LRRC29Q8WV35 223 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 AQP3Q92482 292 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 RPL3LQ92901 407 aaKnown RBP13.6□□□□□ -0.23
COL2A1-206ENST00000483376 SPSB1Q96BD6 273 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 SMIM19Q96E16 107 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
COL2A1-206ENST00000483376 DUSP21Q9H596 190 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 GPR173Q9NS66 373 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 UBAP1Q9NZ09 502 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 ERVK-18Q9QC07 812 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 SLC7A11Q9UPY5 501 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 TPRKBQ9Y3C4 175 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
COL2A1-206ENST00000483376 J3QT63 122 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 EGR1P18146 543 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 C21orf33P30042 268 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 RBMXP38159 391 aaKnown RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 NPY4RP50391 375 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 WNT4P56705 351 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 BDH1Q02338 343 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 MICBQ29980 383 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ATPAF1Q5TC12 328 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 PARP16Q8N5Y8 322 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 NANOGP1Q8N7R0 232 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 OR51A4Q8NGJ6 313 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 OR10AC1Q8NH08 325 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 MYDGFQ969H8 173 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ZNF184Q99676 751 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-206ENST00000483376 PKIBQ9C010 78 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 RASSF4Q9H2L5 321 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 HIF1ANQ9NWT6 349 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 RASL12Q9NYN1 266 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 ERGIC3Q9Y282 383 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 POLDIP2Q9Y2S7 368 aa13.59□□□□□ -0.23
COL2A1-206ENST00000483376 KIAA1324LA8MWY0 1029 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-206ENST00000483376 J3QLI3 93 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 ZNF205O95201 554 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 LALBAP00709 142 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 CD80P33681 288 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 GTF2A1P52655 376 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-206ENST00000483376 IL24Q13007 206 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 XAF1Q6GPH4 301 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 HAGHLQ6PII5 290 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-206ENST00000483376 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 FAM90A1Q86YD7 464 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 POC1AQ8NBT0 407 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 OR8B3Q8NGG8 313 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 OR13C3Q8NGS6 347 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 FGGYQ96C11 551 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 OR8B2Q96RD0 313 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 PDCD1LG2Q9BQ51 273 aa13.58□□□□□ -0.24
COL2A1-206ENST00000483376 METTL17Q9H7H0 456 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-206ENST00000483376 IGKV1-9A0A0C4DH69 117 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 A0A0G2JMP0 313 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 A0A0X1KG70 313 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 A6NIN4 97 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 MYL12BO14950 172 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
COL2A1-206ENST00000483376 PGA5P0DJD9 388 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 ZNF20P17024 532 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-206ENST00000483376 ATF1P18846 271 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 PRKACBP22694 351 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 CRHBPP24387 322 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 ZFP36P26651 326 aaKnown RBP13.57□□□□□ -0.24
COL2A1-206ENST00000483376 HAAOP46952 286 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 IRF3Q14653 427 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 RBM48Q5RL73 367 aaKnown RBP13.57□□□□□ -0.24
COL2A1-206ENST00000483376 STUMQ69YW2 141 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-206ENST00000483376 ZNF529Q6P280 563 aa13.57□□□□□ -0.24
COL2A1-206ENST00000483376 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms