RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 MED30Q96HR3 178 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 WDR13Q9H1Z4 485 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 PLEKHA1Q9HB21 404 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 SNTG1Q9NSN8 517 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 SLC22A13Q9Y226 551 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 V9GYS6 101 aa11.51□□□□□ -0.57
VARS-225ENST00000482996 A0A1B0GTI1 187 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 DLGAP1O14490 977 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 SYT7O43581 403 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 TOX4O94842 621 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 PLATP00750 562 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 TGM4P49221 684 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 BPIFB3P59826 476 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 IKZF1Q13422 519 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 OCLNQ16625 522 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 OGFRL1Q5TC84 451 aaPredicted RBP11.5□□□□□ -0.57
VARS-225ENST00000482996 TMEM42Q69YG0 159 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
VARS-225ENST00000482996 IZUMO2Q6UXV1 221 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 C12orf54Q6X4T0 127 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 ZNF573Q86YE8 665 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 BCL6BQ8N143 479 aaPredicted RBP11.5□□□□□ -0.57
VARS-225ENST00000482996 PACRGLQ8N7B6 248 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 OR5T2Q8NGG2 359 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 OR14K1Q8NGZ2 314 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 AQP3Q92482 292 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 RORBQ92753 470 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 TMIGD2Q96BF3 282 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 WDFY2Q96P53 400 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 Q9H521 79 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
VARS-225ENST00000482996 ESM1Q9NQ30 184 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 GPR173Q9NS66 373 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 NLKQ9UBE8 527 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
VARS-225ENST00000482996 GNG8Q9UK08 70 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 PCDHGB1Q9Y5G3 927 aa11.5□□□□□ -0.57
VARS-225ENST00000482996 DAPL1A0PJW8 107 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 E9PQ18 207 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 MPZL2O60487 215 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 RHBDL1O75783 438 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 CCL1P22362 96 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 ARF6P62330 175 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 UBA52P62987 128 aaKnown RBP11.49□□□□□ -0.57
VARS-225ENST00000482996 IL13RA1P78552 427 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 ZNF85Q03923 595 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 BAMBIQ13145 260 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 PDCD1Q15116 288 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 ODF4Q2M2E3 257 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 Q6ZSR3 168 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 KCTD20Q7Z5Y7 419 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 ANGPTL6Q8NI99 470 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 GCDHQ92947 438 aaPredicted RBP11.49□□□□□ -0.57
VARS-225ENST00000482996 MRPL48Q96GC5 212 aaKnown RBP11.49□□□□□ -0.57
VARS-225ENST00000482996 Q96MT0 163 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 MBOAT4Q96T53 435 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
VARS-225ENST00000482996 ZNF184Q99676 751 aaPredicted RBP11.49□□□□□ -0.57
VARS-225ENST00000482996 CNTD2Q9H8S5 307 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 SLC7A11Q9UPY5 501 aa11.49□□□□□ -0.57
VARS-225ENST00000482996 A0A1B0GW55 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 ANKRD61A6NGH8 418 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 OR2AT4A6NND4 320 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 J3QT63 122 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 HAX1O00165 279 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 SIGLEC5O15389 551 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 FCN3O75636 299 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 GATBO75879 557 aaKnown RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 SFTPBP07988 381 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 UBCP0CG48 685 aaKnown RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L2P0CJ85 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L3P0CJ86 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L4P0CJ87 422 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L5P0CJ88 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L6P0CJ89 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L7P0CJ90 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 MMP9P14780 707 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 AMY2BP19961 511 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 PRTN3P24158 256 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 HAAOP46952 286 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 GABRA2P47869 451 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 SMIM21Q3B7S5 101 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 ZNF788Q6ZQV5 615 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 CMTM4Q8IZR5 234 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 H1FXQ92522 213 aaKnown RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 DMRTB1Q96MA1 342 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 GAFA1Q96PS6 74 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms