RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ASPHD2Q6ICH7 369 aa12.97□□□□□ -0.33
CCM2-215ENST00000482714 OR13C9Q8NGT0 318 aa12.97□□□□□ -0.33
CCM2-215ENST00000482714 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
CCM2-215ENST00000482714 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
CCM2-215ENST00000482714 PKIBQ9C010 78 aa12.97□□□□□ -0.33
CCM2-215ENST00000482714 POLDIP2Q9Y2S7 368 aa12.97□□□□□ -0.33
CCM2-215ENST00000482714 TRAV1-2A0A0B4J238 106 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 SSX4O60224 188 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 NDUFS7O75251 213 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 CD37P11049 281 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 MPZP25189 248 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 GIFP27352 417 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 PEG10Q86TG7 708 aaKnown RBP12.96□□□□□ -0.34
CCM2-215ENST00000482714 C11orf53Q8IXP5 236 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 ZSCAN4Q8NAM6 433 aaPredicted RBP12.96□□□□□ -0.34
CCM2-215ENST00000482714 PERPQ96FX8 193 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 RHOFQ9HBH0 211 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 TMEM106BQ9NUM4 274 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 RNF7Q9UBF6 113 aa12.96□□□□□ -0.34
CCM2-215ENST00000482714 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
CCM2-215ENST00000482714 PDZD2O15018 2839 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 FAM230AA0A1W2PPH8 454 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 A0A1W2PPK0 400 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 CDIPTO14735 213 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 NOS1APO75052 506 aaPredicted RBP12.95□□□□□ -0.34
CCM2-215ENST00000482714 LHBP01229 141 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 HCKP08631 526 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 HAAOP46952 286 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 IL24Q13007 206 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 KISS1Q15726 138 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 MPPED2Q15777 294 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 GPR141Q7Z602 305 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 WDR86Q86TI4 376 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 MKXQ8IYA7 352 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 SAXO1Q8IYX7 474 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 SCCPDHQ8NBX0 429 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 CCL17Q92583 94 aa12.95□□□□□ -0.34
CCM2-215ENST00000482714 TXNL4BQ9NX01 149 aaKnown RBP12.95□□□□□ -0.34
CCM2-215ENST00000482714 A6NLC8 198 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 J3QT63 122 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 RP2O75695 350 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 CYB5AP00167 134 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 CPT2P23786 658 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 ZNF93P35789 620 aaPredicted RBP12.94□□□□□ -0.34
CCM2-215ENST00000482714 PMELP40967 661 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 INSL4Q14641 139 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 SPRNQ5BIV9 151 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 CLEC2AQ6UVW9 174 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 TPRA1Q86W33 373 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 AQP3Q92482 292 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 RAB1CQ92928 201 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 DVL3Q92997 716 aaPredicted RBP12.94□□□□□ -0.34
CCM2-215ENST00000482714 TIMD4Q96H15 378 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
CCM2-215ENST00000482714 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 RASL12Q9NYN1 266 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 OTOGQ6ZRI0 2925 aa12.94□□□□□ -0.34
CCM2-215ENST00000482714 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 TRAV8-7A0A075B6U6 113 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 CLDN25C9JDP6 229 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 TMEM178BH3BS89 294 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 PDCD5O14737 125 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 CDC14BO60729 498 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 CHD3Q12873 2000 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 PDZK1IP1Q13113 114 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 RIN1Q13671 783 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 WDR82Q6UXN9 313 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 PNLDC1Q8NA58 520 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 PXT1Q8NFP0 134 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 TRMT10AQ8TBZ6 339 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 FAM168AQ92567 244 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 YIPF5Q969M3 257 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 OR51E2Q9H255 320 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
CCM2-215ENST00000482714 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 UFSP2Q9NUQ7 469 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 NPTNQ9Y639 398 aa12.93□□□□□ -0.34
CCM2-215ENST00000482714 NDUFA2O43678 99 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 AIREO43918 545 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 TMEM127O75204 238 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 GADD45AP24522 165 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 MYL9P24844 172 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 DDI2Q5TDH0 399 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 ASCL4Q6XD76 172 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 LYPD6Q86Y78 171 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 Q8IYB0 196 aa12.92□□□□□ -0.34
CCM2-215ENST00000482714 OR52N4Q8NGI2 321 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms