RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 RNF144BQ7Z419 303 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 ZDHHC22Q8N966 263 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 CPEB3Q8NE35 698 aaKnown RBP13.67□□□□□ -0.22
RXRA-202ENST00000481739 GRPEL2Q8TAA5 225 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 NPRL2Q8WTW4 380 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 APOBEC3DQ96AK3 386 aaPredicted RBP13.67□□□□□ -0.22
RXRA-202ENST00000481739 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
RXRA-202ENST00000481739 RADILQ96JH8 1075 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 FAM210AQ96ND0 272 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 TINAGL1Q9GZM7 467 aaPredicted RBP13.67□□□□□ -0.22
RXRA-202ENST00000481739 BANF2Q9H503 90 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 GPR173Q9NS66 373 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 B3GNT2Q9NY97 397 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 IL36GQ9NZH8 169 aa13.67□□□□□ -0.22
RXRA-202ENST00000481739 SVILO95425 2214 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 FOXI3A8MTJ6 420 aaPredicted RBP13.66□□□□□ -0.22
RXRA-202ENST00000481739 M0QYG6 137 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 SS18L1O75177 396 aaPredicted RBP13.66□□□□□ -0.22
RXRA-202ENST00000481739 OR3A2P47893 321 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 ATP1B3P54709 279 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 RAP2BP61225 183 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 ZNF92Q03936 586 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 MALLQ13021 153 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 NUFIP2Q7Z417 695 aaKnown RBP13.66□□□□□ -0.22
RXRA-202ENST00000481739 CCDC36Q8IYA8 594 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 PXT1Q8NFP0 134 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 PIGTQ969N2 578 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 MGAT4CQ9UBM8 478 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 ELF5Q9UKW6 265 aaPredicted RBP13.66□□□□□ -0.22
RXRA-202ENST00000481739 KCNK7Q9Y2U2 307 aa13.66□□□□□ -0.22
RXRA-202ENST00000481739 DSPP15924 2871 aaKnown RBP13.66□□□□□ -0.22
RXRA-202ENST00000481739 OR14I1A6ND48 311 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 J3QW42 95 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 SOCS1O15524 211 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 AKR7A2O43488 359 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 SSX5O60225 188 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 CSTBP04080 98 aaKnown RBP13.65□□□□□ -0.22
RXRA-202ENST00000481739 IFNA6P05013 189 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 TMEM225BP0DP42 221 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 VSIG10L2P0DP72 767 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 EDN3P14138 238 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 TMEM50BP56557 158 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 MPPED2Q15777 294 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 FAHD2BQ6P2I3 314 aaPredicted RBP13.65□□□□□ -0.22
RXRA-202ENST00000481739 ARRDC1Q8N5I2 433 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 OR5D18Q8NGL1 313 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 ZNF431Q8TF32 576 aaPredicted RBP13.65□□□□□ -0.22
RXRA-202ENST00000481739 FAHD2AQ96GK7 314 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 TRIB1Q96RU8 372 aa13.65□□□□□ -0.22
RXRA-202ENST00000481739 H3BUI4 141 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR2A4O95047 310 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 CNOT4O95628 575 aaKnown RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 HLA-HP01893 362 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 GSTT2P0CG29 244 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 SERPINA2P20848 420 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 RSU1Q15404 277 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■□ 23.8
RXRA-202ENST00000481739 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 CISD2Q8N5K1 135 aaKnown RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 CSNK2A3Q8NEV1 391 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ARHGAP5-AS1Q96IT6 56 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 Q96M66 194 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 SLC6A7Q99884 636 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 REPIN1Q9BWE0 567 aaKnown RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 CLCF1Q9UBD9 225 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 A0A096LPE4 126 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 A0A1W2PPZ6 126 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 RGS11O94810 467 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 CD79AP11912 226 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 DNASE1P24855 282 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 BLVRBP30043 206 aaPredicted RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 HRH1P35367 487 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 TAS2R46P59540 309 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 RAB1AP62820 205 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 TGFBR3Q03167 851 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ARFRP1Q13795 201 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ZNF585AQ6P3V2 769 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 C1QL2Q7Z5L3 287 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ZSCAN4Q8NAM6 433 aaPredicted RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR4S1Q8NGB4 309 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR2T35Q8NGX2 323 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 OR4K15Q8NH41 348 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ST8SIA4Q92187 359 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 GPR137Q96N19 417 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 POFUT1Q9H488 388 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 ELL3Q9HB65 397 aaPredicted RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 EIF3KQ9UBQ5 218 aaKnown RBP13.64□□□□□ -0.23
RXRA-202ENST00000481739 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
RXRA-202ENST00000481739 HSPB11Q9Y547 144 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms