RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 LYZL4Q96KX0 146 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 ELAC2Q9BQ52 826 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 FAM234AQ9H0X4 552 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 RANBP3Q9H6Z4 567 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 ABCB9Q9NP78 766 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 CMC2Q9NRP2 79 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 VNN3Q9NY84 501 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 ZNF222Q9UK12 451 aa7.64□□□□□ -1.19
SMARCE1-210ENST00000481231 E9PQ18 207 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 RHBDL1O75783 438 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 H2BFMP0C1H6 154 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 PSG2P11465 335 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 ATP6V1B2P21281 511 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 GLRA1P23415 457 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 GPM6AP51674 278 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 BMXP51813 675 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 AANATQ16613 207 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 CYP2R1Q6VVX0 501 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 RNF144BQ7Z419 303 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 CPLX4Q7Z7G2 160 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 NDUFA11Q86Y39 141 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 MKXQ8IYA7 352 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 ZDHHC23Q8IYP9 409 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 FAM185AQ8N0U4 392 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 ZNRF1Q8ND25 227 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 OR8B12Q8NGG6 310 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 PIGCQ92535 297 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 OTULINQ96BN8 352 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 CLPTM1LQ96KA5 538 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 CITED2Q99967 270 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 DGCR6LQ9BY27 220 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 NPFFR1Q9GZQ6 430 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 MEGF9Q9H1U4 602 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 YY1AP1Q9H869 796 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 RAB18Q9NP72 206 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 C19orf12Q9NSK7 152 aa7.63□□□□□ -1.19
SMARCE1-210ENST00000481231 A0A1W2PRX2 142 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 ZNF732B4DXR9 585 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 SELENOFO60613 162 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 GLCEO94923 617 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 LYNP07948 512 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 COX7A1P24310 79 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 CAPZA1P52907 286 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 PSMA6P60900 246 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 GNG3P63215 75 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 EMX1Q04741 257 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 MICAQ29983 383 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 SHFQ7M4L6 423 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 ZNF454Q8N9F8 522 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 PAPD5Q8NDF8 572 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 WFDC9Q8NEX5 89 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 OR5K1Q8NHB7 308 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 OTOSQ8NHW6 89 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 PIFOQ8TCI5 191 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 SDSLQ96GA7 329 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 FAM107BQ9H098 131 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 OR51V1Q9H2C8 321 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 OR51I2Q9H344 312 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 ZNF702PQ9H963 129 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 TAS2R1Q9NYW7 299 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 KLHDC2Q9Y2U9 406 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 SAMHD1Q9Y3Z3 626 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 U3KQV3 271 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
SMARCE1-210ENST00000481231 HERC2O95714 4834 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 MTRF1O75570 445 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 RPL31P62899 125 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 HABP2Q14520 560 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 SPATS1Q496A3 300 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 HSP90B2PQ58FF3 399 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 CEP78Q5JTW2 689 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 NKAPLQ5M9Q1 402 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 PLBD1Q6P4A8 553 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 CD300LDQ6UXZ3 194 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 LIAT1Q6ZQX7 453 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 THAP5Q7Z6K1 395 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 DEFB107AQ8IZN7 70 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 C11orf42Q8N5U0 333 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 FAM81AQ8TBF8 368 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 TEX47Q8TBZ9 253 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 THEM6Q8WUY1 208 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 AQP3Q92482 292 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 HIST1H2AAQ96QV6 131 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 NKX3-1Q99801 234 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 HEXA-AS1Q9H8Q6 139 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 REEP1Q9H902 201 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 SERTAD4Q9NUC0 356 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 ARL8BQ9NVJ2 186 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 ACTR3BQ9P1U1 418 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 LRP12Q9Y561 859 aa7.61□□□□□ -1.19
SMARCE1-210ENST00000481231 TCRBV5S2A0A599 114 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 OR5B21A6NL26 309 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 RFPL4AA6NLU0 287 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 VGLL3A8MV65 326 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 RFPL4AL1F8VTS6 287 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 H3BN98 237 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 SNX3O60493 162 aa7.6□□□□□ -1.19
SMARCE1-210ENST00000481231 NHLRC4P0CG21 123 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms