RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MROQ9BYG7 248 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 YIPF3Q9GZM5 350 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 YY1AP1Q9H869 796 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 FAM206AQ9NX38 181 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 GTF2A1LQ9UNN4 478 aa12.5□□□□□ -0.41
LIMS3-203ENST00000480744 FAHP16930 419 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 HOXB6P17509 224 aaKnown RBP12.49□□□□□ -0.41
LIMS3-203ENST00000480744 SAA4P35542 130 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 CAV3P56539 151 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 CEACAM21Q3KPI0 293 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 PLCXD3Q63HM9 321 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 HAGHLQ6PII5 290 aaPredicted RBP12.49□□□□□ -0.41
LIMS3-203ENST00000480744 FAM185AQ8N0U4 392 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF671Q8TAW3 534 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 OR51E1Q8TCB6 317 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 UBE2FQ969M7 185 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 DUS3LQ96G46 650 aaKnown RBP12.49□□□□□ -0.41
LIMS3-203ENST00000480744 PBOV1Q9GZY1 135 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 OR51I2Q9H344 312 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 METTL8Q9H825 291 aaKnown RBP12.49□□□□□ -0.41
LIMS3-203ENST00000480744 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 GPR84Q9NQS5 396 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 DNAJB9Q9UBS3 223 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 PIGLQ9Y2B2 252 aa12.49□□□□□ -0.41
LIMS3-203ENST00000480744 IGKV1D-17A0A075B6S4 117 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 H0YAE9 185 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 M0R1W7 72 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 PSG2P11465 335 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 UBE2E1P51965 193 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 CRISP1P54107 249 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 PROK1P58294 105 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 RIPPLY1Q0D2K3 151 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 KPNB1Q14974 876 aaKnown RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 DEGS2Q6QHC5 323 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 TNFRSF14Q92956 283 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 OR8B4Q96RC9 309 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 TEAD3Q99594 435 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 RBM4BQ9BQ04 359 aaKnown RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 MMP27Q9H306 513 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 PAPOLBQ9NRJ5 636 aaKnown RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
LIMS3-203ENST00000480744 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
LIMS3-203ENST00000480744 VWFP04275 2813 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 OR5B21A6NL26 309 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 CIB2O75838 187 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 CLPXO76031 633 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ACTR3P61158 418 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ATP6AP1Q15904 470 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF679Q8IYX0 411 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ASB17Q8WXJ9 295 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 AQP3Q92482 292 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 PPP1R14AQ96A00 147 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 CNN2Q99439 309 aaKnown RBP12.47□□□□□ -0.41
LIMS3-203ENST00000480744 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ENPP5Q9UJA9 477 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 MAB21L2Q9Y586 359 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 TMEM14AQ9Y6G1 99 aa12.47□□□□□ -0.41
LIMS3-203ENST00000480744 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 H3BNX3 289 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 H3BUX3 64 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 M0R129 80 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ANGPTL7O43827 346 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 PRKYO43930 277 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF254O75437 659 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ATP6V1B1P15313 513 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 TGFBR2P37173 567 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ESRRGP62508 458 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ROM1Q03395 351 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 EGR3Q06889 387 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 ZNF684Q5T5D7 378 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 PYDC1Q8WXC3 89 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 GPR173Q9NS66 373 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 C19orf12Q9NSK7 152 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 NUFIP1Q9UHK0 495 aaKnown RBP12.46□□□□□ -0.41
LIMS3-203ENST00000480744 SF3B6Q9Y3B4 125 aaKnown RBP12.46□□□□□ -0.41
LIMS3-203ENST00000480744 AP4S1Q9Y587 144 aa12.46□□□□□ -0.41
LIMS3-203ENST00000480744 NOTCH1P46531 2555 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms