RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.51
ATG4B-218ENST00000479554 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 ZNF879B4DU55 563 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 P2RY10O00398 339 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 LIPFP07098 398 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 CFHR2P36980 270 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 GNALP38405 381 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 OPRL1P41146 370 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 BPIFB3P59826 476 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 IL13RA1P78552 427 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 SHISA2Q6UWI4 295 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 RHOUQ7L0Q8 258 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 MEPCEQ7L2J0 689 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 ZDHHC16Q969W1 377 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 SGK3Q96BR1 496 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 ISOC1Q96CN7 298 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 PGAM5Q96HS1 289 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 CHCHD3Q9NX63 227 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 EXOGQ9Y2C4 368 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 EXOSC1Q9Y3B2 195 aaKnown RBP11.89□□□□□ -0.51
ATG4B-218ENST00000479554 MEGF8Q7Z7M0 2845 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
ATG4B-218ENST00000479554 IGHV3OR15-7A0A075B7D8 119 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-218ENST00000479554 TMPRSS2O15393 492 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-218ENST00000479554 TOX4O94842 621 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 LHBP01229 141 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 SFTPBP07988 381 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 MYL12AP19105 171 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 GSK3AP49840 483 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 KLHL12Q53G59 568 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 TEX36Q5VZQ5 186 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 FTMTQ8N4E7 242 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 OR1M1Q8NGA1 313 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 RAB2BQ8WUD1 216 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 YIPF6Q96EC8 236 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 BCL7BQ9BQE9 202 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 MND1Q9BWT6 205 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 RGCCQ9H4X1 137 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 PTTG2Q9NZH5 202 aa11.88□□□□□ -0.51
ATG4B-218ENST00000479554 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 DVL1O14640 695 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 MYL12BO14950 172 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 SELENOFO60613 162 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 MMP9P14780 707 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 MUC1P15941 1255 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-218ENST00000479554 NAA10P41227 235 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-218ENST00000479554 POU4F2Q12837 409 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 MICBQ29980 383 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 LCN1P1Q5VSP4 162 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 ANKRD13BQ86YJ7 626 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 NANOGP1Q8N7R0 232 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 THEM6Q8WUY1 208 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 ST8SIA4Q92187 359 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 C12orf43Q96C57 262 aaKnown RBP11.87□□□□□ -0.51
ATG4B-218ENST00000479554 WDFY2Q96P53 400 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 TBX15Q96SF7 602 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 MICU1Q9BPX6 476 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 FUNDC2Q9BWH2 189 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 JAM3Q9BX67 310 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 UNKLQ9H9P5 680 aaKnown RBP11.87□□□□□ -0.51
ATG4B-218ENST00000479554 ZNF319Q9P2F9 582 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 KAAG1Q9UBP8 84 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
ATG4B-218ENST00000479554 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 SRRM5B3KS81 715 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 ECDO95905 644 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-218ENST00000479554 IGHA1P01876 353 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 SLC2A5P22732 501 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 PSMA6P60900 246 aaKnown RBP11.86□□□□□ -0.51
ATG4B-218ENST00000479554 RPS7P62081 194 aaKnown RBP11.86□□□□□ -0.51
ATG4B-218ENST00000479554 PDCD1Q15116 288 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 MED22Q15528 200 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 C11orf91Q3C1V1 193 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 WDR38Q5JTN6 314 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 SLC35D3Q5M8T2 416 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 C11orf53Q8IXP5 236 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 GATAD2BQ8WXI9 593 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 TEAD3Q99594 435 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms