RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 FTMTQ8N4E7 242 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 NKAIN3Q8N8D7 197 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 TECTBQ96PL2 329 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 MICU1Q9BPX6 476 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 RTL8AQ9BWD3 113 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
CHD3-210ENST00000479080 F8VVB4 439 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 F8VWA3 439 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 AIPO00170 330 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 PDCD5O14737 125 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 LDLRAD4O15165 306 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ANGPTL7O43827 346 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 RHBDL1O75783 438 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 PAHP00439 452 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 MPZP25189 248 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ZNF93P35789 620 aaPredicted RBP11.08□□□□□ -0.64
CHD3-210ENST00000479080 RBP2P50120 134 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 PPOXP50336 477 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 SELENOVP59797 346 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 QRFPP83859 136 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 P2RY14Q15391 338 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ASCL4Q6XD76 172 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ZNF826PQ6ZT77 177 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 JAGN1Q8N5M9 183 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 OR5H6Q8NGV6 325 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 AQP3Q92482 292 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 SORCS2Q96PQ0 1159 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 CACNG6Q9BXT2 260 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 NXF2Q9GZY0 626 aaKnown RBP11.08□□□□□ -0.64
CHD3-210ENST00000479080 SLC22A4Q9H015 551 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ABCB9Q9NP78 766 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 SLC7A11Q9UPY5 501 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
CHD3-210ENST00000479080 ARFGEF3Q5TH69 2177 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 A0A1W2PP11 408 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 LRP5LA4QPB2 252 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 MEGF11A6BM72 1044 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 J3QT63 122 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 OVOL3O00110 214 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 NDUFS7O75251 213 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 PLATP00750 562 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 HPXP02790 462 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 SNRPBP14678 240 aaKnown RBP11.07□□□□□ -0.64
CHD3-210ENST00000479080 EGR1P18146 543 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 CDKN1AP38936 164 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 HAAOP46952 286 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 POU3F4P49335 361 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 ATP1B3P54709 279 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 MTCP1P56278 107 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 SNRPD2P62316 118 aaKnown RBP11.07□□□□□ -0.64
CHD3-210ENST00000479080 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
CHD3-210ENST00000479080 PDZK1IP1Q13113 114 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 MOGQ16653 247 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 AGAP6Q5VW22 663 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 GLT8D1Q68CQ7 371 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 HAGHLQ6PII5 290 aaPredicted RBP11.07□□□□□ -0.64
CHD3-210ENST00000479080 TMEM200AQ86VY9 491 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 UQCC2Q9BRT2 126 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 DYNLRB1Q9NP97 96 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 NKIRAS2Q9NYR9 191 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 MTCH1Q9NZJ7 389 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 OR5V1Q9UGF6 321 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 DAPK2Q9UIK4 370 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
CHD3-210ENST00000479080 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
CHD3-210ENST00000479080 TMEM210A6NLX4 147 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 VSTM5A8MXK1 200 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
CHD3-210ENST00000479080 CDIPTO14735 213 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 LY6HO94772 140 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 GRPP07492 148 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 SFTPBP07988 381 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 ERCC1P07992 297 aaPredicted RBP11.06□□□□□ -0.64
CHD3-210ENST00000479080 HTR2CP28335 458 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 PTGFRP43088 359 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 GATA4P43694 442 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 NPBWR2P48146 333 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 EFNB2P52799 333 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 CCL8P80075 99 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 UNC119Q13432 240 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 OR10K2Q6IF99 312 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 WDR82Q6UXN9 313 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 MOGAT3Q86VF5 341 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 CELF2-AS1Q8N7Q2 184 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 SPERTQ8NA61 448 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms