RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 SLC2A5P22732 501 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 SAA4P35542 130 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 ROM1Q03395 351 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 TAF9Q16594 264 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 C2orf68Q2NKX9 166 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 C11orf88Q6PI97 169 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 KRT74Q7RTS7 529 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF573Q86YE8 665 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 C16orf95Q9H693 158 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 FAM206AQ9NX38 181 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 H2AFY2Q9P0M6 372 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 NUFIP1Q9UHK0 495 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 SLC22A31A6NKX4 558 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 RNASEK-C17orf49H0YIS7 233 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 KCNAB3O43448 404 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 FKBP6O75344 327 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 FCN3O75636 299 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 DHRS3O75911 302 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 T-ENOLP0DO92 83 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 ESRRGP62508 458 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 DGUOKQ16854 277 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 CEP78Q5JTW2 689 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 HAGHLQ6PII5 290 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 FAM185AQ8N0U4 392 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 OR51G2Q8NGK0 314 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 DUS3LQ96G46 650 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 OR8B4Q96RC9 309 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 TEAD3Q99594 435 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 PBOV1Q9GZY1 135 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 OR51I2Q9H344 312 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 HEXA-AS1Q9H8Q6 139 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 GPR84Q9NQS5 396 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 TVP23BQ9NYZ1 205 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 PIGLQ9Y2B2 252 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
SMARCE1-209ENST00000478349 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 TSPAN9O75954 239 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 NRASP01111 189 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 MRPL3P09001 348 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 SELLP14151 372 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 CRISP1P54107 249 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 PROK1P58294 105 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 AANATQ16613 207 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 TRPM8Q7Z2W7 1104 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 FGFRL1Q8N441 504 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF561Q8N587 486 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 Q8N7P7 452 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 BBS1Q8NFJ9 593 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 OR4C13Q8NGP0 309 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 OR51E1Q8TCB6 317 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 AQP3Q92482 292 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 SDSLQ96GA7 329 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 RBM4BQ9BQ04 359 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 PPP1R3EQ9H7J1 279 aa11.84□□□□□ -0.51
SMARCE1-209ENST00000478349 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 DHRS7CA6NNS2 312 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 ZNF670-ZNF695F2Z2N8 137 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 LOC110117498-PIK3R3F6TDL0 507 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 J3QT63 122 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 DLGAP1O14490 977 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 ANGPTL7O43827 346 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 PSG2P11465 335 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 FAHP16930 419 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 AMY2BP19961 511 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 PRKACGP22612 351 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 GABRA5P31644 462 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 KLRD1Q13241 179 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 CLVS2Q5SYC1 327 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 ZNF322Q6U7Q0 402 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 LIAT1Q6ZQX7 453 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 Q6ZSV7 163 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 GID4Q8IVV7 300 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 TNFRSF14Q92956 283 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 PLEKHA1Q9HB21 404 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 USE1Q9NZ43 259 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 PKD1L1Q8TDX9 2849 aa11.83□□□□□ -0.52
SMARCE1-209ENST00000478349 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
SMARCE1-209ENST00000478349 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
SMARCE1-209ENST00000478349 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
SMARCE1-209ENST00000478349 TCRBV3S1A0A5B6 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms