RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LHFPL6Q9Y693 200 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 U3KQA8 63 aa4.34□□□□□ -1.71
SF3B6-202ENST00000478050 LAMA5O15230 3695 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FBN2P35556 2912 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 TRAV14DV4A0A0A6YYC5 116 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 KANTRA0A1W2PQU2 76 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MFSD2BA6NFX1 497 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZSCAN5BA6NJL1 495 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 C9J4A7 227 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 KRBOX1C9JBD0 128 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SULT2B1O00204 365 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 EIF1BO60739 113 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR2J2O76002 312 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 STK17BO94768 372 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR2F2O95006 317 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 VAMP5O95183 116 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 HLA-AP01891 365 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 APOC1P02654 83 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 IFNA6P05013 189 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FCER2P06734 321 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 NMBP08949 121 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 QDPRP09417 244 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GLI4P10075 376 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PRF1P14222 555 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MGMTP16455 207 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZP3P21754 424 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZBTB25P24278 435 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 CTSSP25774 331 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MPGP29372 298 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 HOXA6P31267 233 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 THBS4P35443 961 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MPLP40238 635 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 CASRP41180 1078 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GUCA1AP43080 201 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 CSNK1A1P48729 337 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 CX3CR1P49238 355 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PRKXP51817 358 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF133P52736 654 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FOXL2P58012 376 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF121P58317 390 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 CXADRP78310 365 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 TRA2AQ13595 282 aaKnown RBP eCLIP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR2F1Q13607 317 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 IL11RAQ14626 422 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ARL6IP1Q15041 203 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PCOLCEQ15113 449 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 EXT1Q16394 746 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 HIST3H3Q16695 136 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SCGB2B2Q4G0G5 96 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 LY6G6FQ5SQ64 297 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 DCAF12L2Q5VW00 463 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PMS2CLQ68D20 193 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 RGS7BPQ6MZT1 257 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF585AQ6P3V2 769 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 TMPPEQ6ZT21 453 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF546Q86UE3 836 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GPAT4Q86UL3 456 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 NAA40Q86UY6 237 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 COMMD2Q86X83 199 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ANGPTL5Q86XS5 388 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF101Q8IZC7 436 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR5AS1Q8N127 324 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GTPBP8Q8N3Z3 284 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 KCNRGQ8N5I3 272 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF283Q8N7M2 679 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 LINC00482Q8N8I6 264 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR56B1Q8NGI3 324 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR5M9Q8NGP3 310 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 KCNG3Q8TAE7 436 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 M1APQ8TC57 530 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 OR51E1Q8TCB6 317 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MITD1Q8WV92 249 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM54Q969K7 222 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PGAM5Q96HS1 289 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SCGB3A2Q96PL1 93 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PHB2Q99623 299 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GAL3ST1Q99999 423 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 URM1Q9BTM9 101 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PDCD10Q9BUL8 212 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 REG4Q9BYZ8 158 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MFFQ9GZY8 342 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 LPAR5Q9H1C0 372 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SLC25A32Q9H2D1 315 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 NARFLQ9H6Q4 476 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 PNRC2Q9NPJ4 139 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GPR84Q9NQS5 396 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 SDHAF2Q9NX18 166 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MYEF2Q9P2K5 600 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 GHRLQ9UBU3 117 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FBXL2Q9UKC9 423 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 VSIG4Q9Y279 399 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FARSAQ9Y285 508 aaKnown RBP4.33□□□□□ -1.72
SF3B6-202ENST00000478050 MRPS28Q9Y2Q9 187 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms