RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 RPUSD1Q9UJJ7 312 aaKnown RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 RPS6KA6Q9UK32 745 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 VPREB3Q9UKI3 123 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 BAG5Q9UL15 447 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 RAB21Q9UL25 225 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 LOC100653049A0A140TA62 436 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 GMNCA6NCL1 334 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 OOEPA6NGQ2 149 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 LRRC30A6NM36 301 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 CD300LBA8K4G0 201 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 EFCAB9A8MZ26 197 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 NPFFO15130 113 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 CHST1O43916 411 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SLC16A7O60669 478 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KRT34O76011 436 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 PPP1R3DO95685 299 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 BAG2O95816 211 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 LIPFP07098 398 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KDELR2P33947 212 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SAA4P35542 130 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 GGT2P36268 569 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 RPS27P42677 84 aaKnown RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 RGS6P49758 472 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 NPY4RP50391 375 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 CSNK2BP67870 215 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF92Q03936 586 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KRR1Q13601 381 aaKnown RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 HERPUD1Q15011 391 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 PCK2Q16822 640 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 ZBED5Q49AG3 693 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 CDONQ4KMG0 1287 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 TTMPQ5BVD1 217 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 BEND6Q5SZJ8 279 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 METTL11BQ5VVY1 283 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 DHRS7BQ6IAN0 325 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 METAP1DQ6UB28 335 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 TMPRSS11FQ6ZWK6 438 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 OAFQ86UD1 273 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 LINC00346Q8IVM7 164 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 OFCC1Q8IZS5 231 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 C1orf87Q8N0U7 546 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 OR6V1Q8N148 313 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 FAM216BQ8N7L0 139 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SCCPDHQ8NBX0 429 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SLC26A10Q8NG04 563 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 FNDC8Q8TC99 324 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SLC7A13Q8TCU3 470 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SLC26A7Q8TE54 656 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 ERGIC1Q969X5 290 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SLCO4A1Q96BD0 722 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 PHF21AQ96BD5 680 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 PRRC1Q96M27 445 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF570Q96NI8 536 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 CCL13Q99616 98 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 POLR2J2Q9GZM3 115 aaKnown RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 FGF23Q9GZV9 251 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 POLR2J3Q9H1A7 115 aaKnown RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 MMP28Q9H239 520 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 PPA2Q9H2U2 334 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 RERGLQ9H628 205 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 NMNAT1Q9HAN9 279 aaPredicted RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 TMBIM4Q9HC24 238 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 MRPL22Q9NWU5 206 aaKnown RBP3.7□□□□□ -1.82
CKS1B-207ENST00000477676 ERVK-18Q9QC07 812 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KAAG1Q9UBP8 84 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 B9D1Q9UPM9 204 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 SIGLEC7Q9Y286 467 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 NDUFAF1Q9Y375 327 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 KPTNQ9Y664 436 aa3.7□□□□□ -1.82
CKS1B-207ENST00000477676 WI2-2373I1.2A0A1W2PRP0 233 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ELOVL7A1L3X0 281 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR6C68A6NDL8 312 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 SAC3D1A6NKF1 404 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 F5H5K5 113 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 H3BUX3 64 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ACOT8O14734 319 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ANGPT2O15123 496 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 AHCYL1O43865 530 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 KHDRBS3O75525 346 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TXNDC12O95881 172 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 LCATP04180 440 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 FBP1P09467 338 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 CD28P10747 220 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 NR2C1P13056 603 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 IRF2P14316 349 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 MT3P25713 68 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GABRA5P31644 462 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OTX1P32242 354 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 RPL4P36578 427 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TGFBR2P37173 567 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 MDH1P40925 334 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GUCA1AP43080 201 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 KIR2DS4P43632 304 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OMPP47874 163 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TGM4P49221 684 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 SELENOWP63302 87 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ST3GAL3Q11203 375 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TRAP1Q12931 704 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms