RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ZNF732B4DXR9 585 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 SOCS1O15524 211 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 SERPINA2P20848 420 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ATP1B3P54709 279 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 TMEM50BP56557 158 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 PLAC9Q5JTB6 97 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 OR5A2Q8NGI9 324 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 MRPL15Q9P015 296 aaKnown RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 RABL2AQ9UBK7 228 aaPredicted RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 RABL2BQ9UNT1 228 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 IGSF10Q6WRI0 2623 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 PTTG1O95997 202 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 SFTPBP07988 381 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 MGMTP16455 207 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 GDNFP39905 211 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 FABP6P51161 128 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 DEFA1P59665 94 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 DEFA3P59666 94 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 NKX6-1P78426 367 aaPredicted RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ZNF260Q3ZCT1 412 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 WDR86Q86TI4 376 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ZC3HAV1LQ96H79 300 aaKnown RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 TMEM59Q9BXS4 323 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 BCL2L14Q9BZR8 327 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ELL3Q9HB65 397 aaPredicted RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
COL4A6-206ENST00000477085 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 KCNK7Q9Y2U2 307 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 MPC1Q9Y5U8 109 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 A0A0A6YYH2 397 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 METTL21EPA6NDL7 271 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 A6NJ64 397 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 H0YL77 283 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 CD40P25942 277 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 NPBWR2P48146 333 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 SNTB1Q13884 538 aaKnown RBP12.34□□□□□ -0.43
COL4A6-206ENST00000477085 GPR176Q14439 515 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 DAZAP2Q15038 168 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-206ENST00000477085 MBNL2Q5VZF2 373 aaKnown RBP12.34□□□□□ -0.43
COL4A6-206ENST00000477085 OLFML2AQ68BL7 652 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 ZNF57Q68EA5 555 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-206ENST00000477085 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 GLCCI1Q86VQ1 547 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 LRP11Q86VZ4 500 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 BATF2Q8N1L9 274 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 FTMTQ8N4E7 242 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 ZNF611Q8N823 705 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 FCAMRQ8WWV6 532 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 AQP3Q92482 292 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 SEH1LQ96EE3 360 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 CNTNAP3BQ96NU0 1288 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 CNTNAP3Q9BZ76 1288 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 NEK6Q9HC98 313 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 ETAA1Q9NY74 926 aa12.34□□□□□ -0.43
COL4A6-206ENST00000477085 PURGQ9UJV8 347 aaKnown RBP12.34□□□□□ -0.43
COL4A6-206ENST00000477085 CFAP46Q8IYW2 2715 aa12.33□□□□□ -0.43
COL4A6-206ENST00000477085 NKX2-6A6NCS4 301 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 DPRXA6NFQ7 191 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 F8VVB4 439 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 F8VWA3 439 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 GNB3P16520 340 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 KITLGP21583 273 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 GRNP28799 593 aaKnown RBP12.33□□□□□ -0.44
COL4A6-206ENST00000477085 BTCP35070 178 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 KIR2DL3P43628 341 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 HAAOP46952 286 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CDNFQ49AH0 187 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 C1QTNF12Q5T7M4 302 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CCBE1Q6UXH8 406 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-206ENST00000477085 Q6ZR03 302 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 SLC25A26Q70HW3 274 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 PXT1Q8NFP0 134 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 OR51F2Q8NH61 342 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 PHF21AQ96BD5 680 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
COL4A6-206ENST00000477085 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 METTL9Q9H1A3 318 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 FAM90A27PA6NNH2 459 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 MLNRO43193 412 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 LYRM1O43325 122 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 SYNGR1O43759 233 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms