RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 H2BFSP57053 126 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 BTN3A2P78410 334 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 CDK3Q00526 305 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 OC90Q02509 493 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 DMWDQ09019 674 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 GAGE5Q13069 117 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 GAGE6Q13070 117 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 FZD2Q14332 565 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 GINS1Q14691 196 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 POU2AF1Q16633 256 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 ACSM3Q53FZ2 586 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 RAB41Q5JT25 222 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 C1orf189Q5VU69 101 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM42Q69YG0 159 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 PODNL1Q6PEZ8 512 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 BTNL8Q6UX41 500 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 NHLRC1Q6VVB1 395 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM182Q6ZP80 229 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 Q6ZPB1 254 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC36A1Q7Z2H8 476 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 UBALD2Q8IYN6 164 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 STPG4Q8N801 248 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 COX18Q8N8Q8 333 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 ARL14EPQ8N8R7 260 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 NOXO1Q8NFA2 376 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC26A10Q8NG04 563 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 OR6N1Q8NGY5 312 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 OR5B3Q8NH48 314 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 OR52E5Q8NH55 327 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 LYPD6BQ8NI32 183 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SFXN5Q8TD22 340 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 UBTD2Q8WUN7 234 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM174Q8WUU8 243 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SMIM4Q8WVI0 70 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 RXFP2Q8WXD0 754 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 PTH2Q96A98 100 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 MBD6Q96DN6 1003 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 NKX3-1Q99801 234 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 MRPL45Q9BRJ2 306 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 PAAF1Q9BRP4 392 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 RSG1Q9BU20 258 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 VAMP8Q9BV40 100 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 LINC00470Q9BZP3 86 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 DEFB129Q9H1M3 183 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 UBE2ZQ9H832 354 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 KCNJ16Q9NPI9 418 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC7A10Q9NS82 523 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM242Q9NWH2 141 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF226Q9NYT6 803 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 SHPKQ9UHJ6 478 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 PILRBQ9UKJ0 227 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 RAI2Q9Y5P3 530 aa5.27□□□□□ -1.57
ECHDC1-215ENST00000475319 POLR2AP24928 1970 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 LRRC37AA6NMS7 1700 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF705FA8MVS1 300 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 HIDE1A8MVS5 230 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 GABARAPH6UMI1 98 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SEMA4FO95754 770 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 MT-ND4P03905 459 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 OPN1SWP03999 348 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF705DP0CH99 300 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF705BP0CI00 300 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 PSG1P11464 419 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ACP5P13686 325 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 CEACAM1P13688 526 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 PPIFP30405 207 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 HNRNPA3P51991 378 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 POLR2JP52435 117 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 OR12D2P58182 307 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TAS2R43P59537 309 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SNRPGP62308 76 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SELENOWP63302 87 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SRPXP78539 464 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TIAL1Q01085 375 aaKnown RBP eCLIP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TLE3Q04726 772 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 PCK2Q16822 640 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM176BQ3YBM2 270 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF585BQ52M93 769 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 LRRC10Q5BKY1 277 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 RTL6Q6ICC9 239 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ENPP7Q6UWV6 458 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 CMC1Q7Z7K0 106 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SYT12Q8IV01 421 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 BEST3Q8N1M1 668 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 PGBD5Q8N414 524 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 KLHDC1Q8N7A1 406 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 FER1L6-AS1Q8NA97 138 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 OR1N2Q8NGR9 330 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 OR5AK2Q8NH90 309 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 RHEBL1Q8TAI7 183 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 Q8WTZ3 238 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 DNASE2BQ8WZ79 361 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 APH1AQ96BI3 265 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM176AQ96HP8 235 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 LMLNQ96KR4 655 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TSSK3Q96PN8 268 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TBX15Q96SF7 602 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 GINS3Q9BRX5 216 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC35B3Q9H1N7 401 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms