RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CLDN20P56880 219 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ZNF117Q03924 483 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 FAHD1Q6P587 224 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 WDR31Q8NA23 367 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 MCHR2Q969V1 340 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 YIPF6Q96EC8 236 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 A0A1B0GTH9 108 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 MED19A0JLT2 244 aaPredicted RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 TMEM30CPA0ZSE6 113 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 FZD6O60353 706 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 PCBP4P57723 403 aaKnown RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 DHODHQ02127 395 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 KIAA1958Q8N8K9 716 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 DUSP21Q9H596 190 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 FBXO34Q9NWN3 711 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 MPZL1O95297 269 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 KRTDAPP60985 99 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 GNG3P63215 75 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 KISS1Q15726 138 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 TMEM215Q68D42 235 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 NCR3LG1Q68D85 454 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 C1orf210Q8IVY1 113 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
VAPB-204ENST00000475243 FCGR3BO75015 233 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 SLC36A1Q7Z2H8 476 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 DND1Q8IYX4 353 aaKnown RBP9.81□□□□□ -0.84
VAPB-204ENST00000475243 GAR1Q9NY12 217 aaKnown RBP9.81□□□□□ -0.84
VAPB-204ENST00000475243 COX7A1P24310 79 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 MRGPREQ86SM8 312 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 BLNKQ8WV28 456 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 LRRC3CA6NJW4 275 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 CD37P11049 281 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 CPN1P15169 458 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 THBS4P35443 961 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 GAMTQ14353 236 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 BTLAQ7Z6A9 289 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 ANKRD37Q7Z713 158 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.81□□□□□ -0.84
VAPB-204ENST00000475243 NGFP01138 241 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 PLEKHA2Q9HB19 425 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 ERRFI1Q9UJM3 462 aaPredicted RBP9.81□□□□□ -0.84
VAPB-204ENST00000475243 BCORQ6W2J9 1755 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 LOC102723971A0A1B0GUV8 181 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 ZNF205O95201 554 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 CYC1P08574 325 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 SLC37A1P57057 533 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 TPBGQ13641 420 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 SPNS3Q6ZMD2 512 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 OR10D3Q8NH80 312 aa9.81□□□□□ -0.84
VAPB-204ENST00000475243 TRAV17A0A0B4J275 112 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 IL11RAQ14626 422 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 PRICKLE4Q2TBC4 344 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 WDR38Q5JTN6 314 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 LINC01555Q8NAE3 123 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 NRTNQ99748 197 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TAAR3PQ9P1P4 343 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 LAMP3Q9UQV4 416 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
VAPB-204ENST00000475243 MTCH2Q9Y6C9 303 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 FAM186AA6NE01 2351 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 FAM157AC9JC47 383 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 HFEQ30201 348 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 OR6S1Q8NH40 331 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 ZNF768Q9H5H4 540 aaKnown RBP9.8□□□□□ -0.84
VAPB-204ENST00000475243 MMP25Q9NPA2 562 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 ARRDC5A6NEK1 342 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 DUS4LO95620 317 aaKnown RBP9.8□□□□□ -0.84
VAPB-204ENST00000475243 ZNF32P17041 273 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TNFRSF1AP19438 455 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 OR3A4PP47883 348 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 FFAR4Q5NUL3 377 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 ACER2Q5QJU3 275 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 DGAT2L6Q6ZPD8 337 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 OR1L4Q8NGR5 311 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 PRR7Q8TB68 274 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 DOK1Q99704 481 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 PSG11Q9UQ72 335 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TRAV1-2A0A0B4J238 106 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 EPPINO95925 133 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 MT-CO3P00414 261 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 WNT1P04628 370 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 FUT3P21217 361 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 MMP15P51511 669 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 C3AR1Q16581 482 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TMPRSS11FQ6ZWK6 438 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 C6orf201Q7Z4U5 140 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 LURAP1Q96LR2 239 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 DOK5Q9P104 306 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 LSM2Q9Y333 95 aaKnown RBP9.8□□□□□ -0.84
VAPB-204ENST00000475243 HSPB2A8KAH6 182 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 B3GALNT1O75752 331 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 SULT1A3P0DMM9 295 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 SULT1A4P0DMN0 295 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 HSPB2Q16082 182 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 Q7L0L9 218 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TGIF2LXQ8IUE1 241 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 RPEQ96AT9 228 aa9.8□□□□□ -0.84
VAPB-204ENST00000475243 TMEM272A0A1B0GTI8 110 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms