RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SYNPRQ8TBG9 265 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 SETD6Q8TBK2 473 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 SLC25A40Q8TBP6 338 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 KLF14Q8TD94 323 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 CHPT1Q8WUD6 406 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 HPSE2Q8WWQ2 592 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 OR5P3Q8WZ94 311 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 TRIM63Q969Q1 353 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 CMBLQ96DG6 245 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 MRPS24Q96EL2 167 aaKnown RBP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 S100A16Q96FQ6 103 aaKnown RBP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 CCDC120Q96HB5 630 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 TM2D1Q9BX74 207 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 OR2J1Q9GZK6 312 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 LPAR5Q9H1C0 372 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 GPR173Q9NS66 373 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 CRIM1Q9NZV1 1036 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 SLC7A11Q9UPY5 501 aa5.66□□□□□ -1.5
ATG4A-207ENST00000474825 RBMX2Q9Y388 322 aaKnown RBP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 NOP16Q9Y3C1 178 aaKnown RBP5.66□□□□□ -1.5
ATG4A-207ENST00000474825 GCN1Q92616 2671 aaKnown RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 DPRXA6NFQ7 191 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 GGT3PA6NGU5 568 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ANKRD30BLA7E2S9 258 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF850A8MQ14 1090 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 FAM25AB3EWG3 89 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 FAM25CB3EWG5 89 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 FAM25GB3EWG6 89 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PRSS44E7EML9 344 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 GABARAPH6UMI1 98 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 SULT1C2O00338 296 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 AKR7A2O43488 359 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF780AO75290 641 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 IGHV3-13P01766 116 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 CRYAAP02489 173 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 CHRM2P08172 466 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 HCKP08631 526 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 FAM157BP0CG42 384 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 CDK2P24941 298 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PTAFRP25105 342 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 MPV17P39210 176 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 OR3A4PP47883 348 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ATP1B3P54709 279 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 MTCP1P56278 107 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 TAS2R20P59543 309 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PDZK1IP1Q13113 114 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PRDX4Q13162 271 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 GPR176Q14439 515 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 OXA1LQ15070 435 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 IGFBP7Q16270 282 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 MSMPQ1L6U9 139 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF718Q3SXZ3 478 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 C4orf17Q53FE4 359 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 NHLRC3Q5JS37 347 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ELP2Q6IA86 826 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 OR2T2Q6IF00 324 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 RAB12Q6IQ22 244 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 C16orf87Q6PH81 154 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 GLIPR1L1Q6UWM5 242 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 MOB3CQ70IA8 216 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF808Q8N4W9 903 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PNLDC1Q8NA58 520 aaKnown RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 OR8G5Q8NG78 346 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 TMEM171Q8WVE6 324 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 SMIM4Q8WVI0 70 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 DEDD2Q8WXF8 326 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 AQP3Q92482 292 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PIGCQ92535 297 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 YIPF5Q969M3 257 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 BORCS8Q96FH0 119 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 C1QTNF6Q9BXI9 259 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 SLC22A4Q9H015 551 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 TLNRD1Q9H1K6 362 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ZNF442Q9H7R0 627 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 RHOFQ9HBH0 211 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 DIABLOQ9NR28 239 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 TPSG1Q9NRR2 321 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 COQ3Q9NZJ6 369 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 GPR160Q9UJ42 338 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 SH3BGRL2Q9UJC5 107 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 ERRFI1Q9UJM3 462 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 PURGQ9UJV8 347 aaKnown RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 TBC1D24Q9ULP9 559 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 MRPS28Q9Y2Q9 187 aaKnown RBP5.65□□□□□ -1.5
ATG4A-207ENST00000474825 SPEF1Q9Y4P9 236 aa5.65□□□□□ -1.5
ATG4A-207ENST00000474825 A0A0A6YYD4 124 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 IGKV1-12A0A0C4DH73 117 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 METTL21EPA6NDL7 271 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A10PA6NDY2 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A18PA6NE21 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A16PA6NEW6 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A20PA6NIJ5 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A8PA6NJQ4 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A7PA6NKC0 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM210A6NLX4 147 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A22PA8MWA6 464 aa5.64□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A12PA8MX19 464 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms