RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TMEM42Q69YG0 159 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 HAGHLQ6PII5 290 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF788Q6ZQV5 615 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 Q6ZSR3 168 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 CATSPERDQ86XM0 798 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 TRUB1Q8WWH5 349 aaKnown RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 AQP3Q92482 292 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 RORBQ92753 470 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 GCDHQ92947 438 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 RFKQ969G6 155 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 WDFY2Q96P53 400 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 GAFA1Q96PS6 74 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 NLKQ9UBE8 527 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 RPUSD1Q9UJJ7 312 aaKnown RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 NKX6-3A6NJ46 265 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 H3BSH0 61 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 HAX1O00165 279 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 NDUFB3O43676 98 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 CCL1P22362 96 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 MTNR1AP48039 350 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 C11orf91Q3C1V1 193 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 CLVS2Q5SYC1 327 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 ANGPTL6Q8NI99 470 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 MBOAT4Q96T53 435 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 DNTTIP1Q9H147 329 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 S100A14Q9HCY8 104 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 AASSQ9UDR5 926 aa14.81□□□□□ -0.04
UPF3A-203ENST00000474056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.81□□□□□ -0.04
UPF3A-203ENST00000474056 CENPVL3A0A0U1RRI6 287 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 SULT1C4O75897 302 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 HAAOP46952 286 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 COMPP49747 757 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-203ENST00000474056 ISL1P61371 349 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 SNRPGP62308 76 aaKnown RBP14.8□□□□□ -0.04
UPF3A-203ENST00000474056 DGUOKQ16854 277 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 DEFB112Q30KQ8 113 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 TP53I3Q53FA7 332 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 LRRC10Q5BKY1 277 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 LY6G5BQ8NDX9 201 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF671Q8TAW3 534 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 SLC29A1Q99808 456 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 DCTN5Q9BTE1 182 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 CNTD2Q9H8S5 307 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 ACOXLQ9NUZ1 547 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 DSCAML1Q8TD84 2053 aa14.8□□□□□ -0.04
UPF3A-203ENST00000474056 FBN3Q75N90 2809 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 IGKV1D-17A0A075B6S4 117 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 OR2AT4A6NND4 320 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 DHRS7CA6NNS2 312 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 DLGAP1O14490 977 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 SIGLEC5O15389 551 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 SYNGR1O43759 233 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 PSG2P11465 335 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 CFPP27918 469 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 GABRA2P47869 451 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 IL13RA1P78552 427 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 SLC25A30Q5SVS4 291 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 FAM220AQ7Z4H9 259 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 PRSS35Q8N3Z0 413 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 LHX4Q969G2 390 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 RNF166Q96A37 237 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-203ENST00000474056 TMIGD2Q96BF3 282 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 RNFT2Q96EX2 444 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF488Q96MN9 340 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 C9orf16Q9BUW7 83 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 ZMAT3Q9HA38 289 aaKnown RBP14.79□□□□□ -0.04
UPF3A-203ENST00000474056 SLC25A10Q9UBX3 287 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-203ENST00000474056 GNG8Q9UK08 70 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF222Q9UK12 451 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 GMPPBQ9Y5P6 360 aa14.79□□□□□ -0.04
UPF3A-203ENST00000474056 TENM1Q9UKZ4 2725 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 A0A1B0GVI7 797 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 PQLC2LA1A4F0 135 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 J3QT63 122 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 SYT7O43581 403 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 ACAA1P09110 424 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-203ENST00000474056 GABRB1P18505 474 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 KIR3DL2P43630 455 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 BPIFB3P59826 476 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 PDCD1Q15116 288 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 SLC9A3R2Q15599 337 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 OCLNQ16625 522 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 CDONQ4KMG0 1287 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 MEDAGQ5VYS4 303 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 ACP7Q6ZNF0 438 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 VMO1Q7Z5L0 202 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 C10orf67Q8IYJ2 551 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 BATF2Q8N1L9 274 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 PQLC1Q8N2U9 271 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 POC1AQ8NBT0 407 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 TRMT10AQ8TBZ6 339 aaKnown RBP14.78□□□□□ -0.04
UPF3A-203ENST00000474056 H1FXQ92522 213 aaKnown RBP14.78□□□□□ -0.04
UPF3A-203ENST00000474056 MED30Q96HR3 178 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 PLEKHA1Q9HB21 404 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 ONECUT1Q9UBC0 465 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 MAB21L2Q9Y586 359 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
UPF3A-203ENST00000474056 LOC107986453A0A1B0GWG9 222 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 J3QRE1 110 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 GPR37O15354 613 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms