RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
DDX56-209ENST00000473924 KCNJ8Q15842 424 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 DMKNQ6E0U4 476 aaPredicted RBP10.42□□□□□ -0.74
DDX56-209ENST00000473924 SFRP4Q6FHJ7 346 aaPredicted RBP10.42□□□□□ -0.74
DDX56-209ENST00000473924 Q71RC1 249 aaPredicted RBP10.42□□□□□ -0.74
DDX56-209ENST00000473924 UTS2BQ765I0 119 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 SERPINA12Q8IW75 414 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 GCSAMQ8N6F7 178 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 OR5D14Q8NGL3 314 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 OR13C9Q8NGT0 318 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 RPS4Y2Q8TD47 263 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 GHSRQ92847 366 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 BORCS8Q96FH0 119 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 NEK6Q9HC98 313 aa10.42□□□□□ -0.74
DDX56-209ENST00000473924 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 B4DSR2 109 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 LGALS8O00214 317 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 AKR7A2O43488 359 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 CD5LO43866 347 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 RHBDL1O75783 438 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 FSTL3O95633 263 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 TGFAP01135 160 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 LHBP01229 141 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 HSMCR30P0CW71 290 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 ZNF16P17020 682 aaPredicted RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 ATF1P18846 271 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 PRKACBP22694 351 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 AZGP1P25311 298 aaKnown RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 CFHR2P36980 270 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 BDH1Q02338 343 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 IRF3Q14653 427 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 ZNF404Q494X3 552 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 LINC01356Q8N9X3 169 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 AQP3Q92482 292 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 RGP1Q92546 391 aaPredicted RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 TMEM106AQ96A25 262 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 MSI2Q96DH6 328 aaKnown RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 OR5M11Q96RB7 305 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 TMEM246Q9BRR3 403 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 YTHDF1Q9BYJ9 559 aaKnown RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 ZCCHC4Q9H5U6 513 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 PATZ1Q9HBE1 687 aaKnown RBP10.41□□□□□ -0.74
DDX56-209ENST00000473924 LPAR2Q9HBW0 351 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 YAE1D1Q9NRH1 226 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 DNAJB11Q9UBS4 358 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
DDX56-209ENST00000473924 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 SRRM5B3KS81 715 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 FAM157AC9JC47 383 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 J3QT63 122 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 PLPP2O43688 288 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 RPS2P15880 293 aaKnown RBP10.4□□□□□ -0.74
DDX56-209ENST00000473924 EGR1P18146 543 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 GLRA1P23415 457 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 MAP2K4P45985 399 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 RBP2P50120 134 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 ATP1B3P54709 279 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 MTCP1P56278 107 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 GABARAPL2P60520 117 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 KRTAP1-1Q07627 177 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 ACSM1Q08AH1 577 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 MICBQ29980 383 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 YIF1BQ5BJH7 314 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 FAM166AQ6J272 317 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 DCDC5Q6ZRR9 648 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 LHFPL2Q6ZUX7 228 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 NLRC3Q7RTR2 1065 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 ANGPTL5Q86XS5 388 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 PARP16Q8N5Y8 322 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 DNAAF1Q8NEP3 725 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 OR13C5Q8NGS8 318 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 SPSB1Q96BD6 273 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 PGLYRP3Q96LB9 341 aa10.4□□□□□ -0.74
DDX56-209ENST00000473924 LSM2Q9Y333 95 aaKnown RBP10.4□□□□□ -0.74
DDX56-209ENST00000473924 ZNF469Q96JG9 3925 aaPredicted RBP10.4□□□□□ -0.74
DDX56-209ENST00000473924 IGKV1-9A0A0C4DH69 117 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 MAGEB3O15480 346 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 NDUFA2O43678 99 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 SULT1B1O43704 296 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 SYNGR1O43759 233 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 CYB5AP00167 134 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 PLATP00750 562 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 GYPAP02724 150 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 CD1AP06126 327 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 MSMBP08118 114 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 HCKP08631 526 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 MUC1P15941 1255 aaPredicted RBP10.39□□□□□ -0.75
DDX56-209ENST00000473924 RAB3AP20336 220 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 Q499Y3 187 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 ESCO2Q56NI9 601 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 TEX36Q5VZQ5 186 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
DDX56-209ENST00000473924 SVOPQ8N4V2 548 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms