RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EFHD2Q96C19 240 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C8orf44Q96CB5 159 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RASD2Q96D21 266 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DNAJA3Q96EY1 480 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SH3YL1Q96HL8 342 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PGLYRP3Q96LB9 341 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SAMD8Q96LT4 415 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 Q96MT0 163 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NEDD4LQ96PU5 975 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TRNT1Q96Q11 434 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IL4I1Q96RQ9 567 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF607Q96SK3 696 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MCHR1Q99705 422 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 APOL4Q9BPW4 351 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 BCL7BQ9BQE9 202 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CHRDL1Q9BU40 450 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NUDT9Q9BW91 350 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TTTY10Q9BZA0 68 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 UCK2Q9BZX2 261 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ROGDIQ9GZN7 287 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC90BQ9GZT6 254 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NXF2Q9GZY0 626 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RAB33BQ9H082 229 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NXF5Q9H1B4 397 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DCSTAMPQ9H295 470 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MIXL1Q9H2W2 232 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR52D1Q9H346 318 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RIMS4Q9H426 269 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ANKRD19PQ9H560 264 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SYNDIG1Q9H7V2 258 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TRIM45Q9H8W5 580 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 AKIRIN1Q9H9L7 192 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GPN2Q9H9Y4 310 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C3orf14Q9HBI5 128 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ADGRL4Q9HBW9 690 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MCCC2Q9HCC0 563 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ANKHQ9HCJ1 492 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 VCX3AQ9NNX9 186 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FGF20Q9NP95 211 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 POLE4Q9NR33 117 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PRTFDC1Q9NRG1 225 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CUTCQ9NTM9 273 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NDUFB11Q9NX14 153 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IMPAD1Q9NX62 359 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MS4A12Q9NXJ0 267 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TVP23BQ9NYZ1 205 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CNOT2Q9NZN8 540 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NDUFA13Q9P0J0 144 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CHRNA9Q9UGM1 479 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 WARS2Q9UGM6 360 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FBXL4Q9UKA2 621 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PILRBQ9UKJ0 227 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 BLOC1S6Q9UL45 172 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 COPS3Q9UNS2 423 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MGAT4BQ9UQ53 548 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SLC9A8Q9Y2E8 581 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 KLHDC2Q9Y2U9 406 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IFT52Q9Y366 437 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CAB39Q9Y376 341 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TPRKBQ9Y3C4 175 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MMACHCQ9Y4U1 282 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ORC6Q9Y5N6 252 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 AUP1Q9Y679 476 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CLCA3PQ9Y6N3 262 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF780BQ9Y6R6 833 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 V9GYH0 126 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SPACA6W5XKT8 324 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NSD1Q96L73 2696 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NAV2Q8IVL1 2488 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SETXQ7Z333 2677 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 WNK1Q9H4A3 2382 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 IGLV3-12A0A075B6K2 115 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 A0A087WUJ7 227 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 IGKV1D-43A0A0B4J1Z2 117 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TRBV11-1A0A0K0K1C0 115 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 LOC100506127A0A0U1RQW1 187 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1B0GTH9 108 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1B0GX78 115 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM72A0PK05 275 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TRAPPC13A5PLN9 417 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 EFCAB10A6NFE3 127 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FRG2CA6NGY1 282 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SAGE2PA6NJ88 616 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 VSTM2BA6NLU5 285 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ANXA2P2A6NMY6 339 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 C12orf71A8MTZ7 269 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 EFCAB9A8MZ26 197 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 IDSB3KWA1 339 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS46E5RG02 174 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FTCDNL1E5RQL4 147 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF670-ZNF695F2Z2N8 137 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 BOLA2-SMG1P6H3BVE0 249 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 H7C1C5 153 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 M0R296 226 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 DCTN6O00399 190 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CCRL2O00421 344 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 GABRPO00591 440 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MYL12BO14950 172 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SLC22A1O15245 554 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TXNL1O43396 289 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms