RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ZNF561Q8N587 486 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 IQCF1Q8N6M8 205 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 OR5T2Q8NGG2 359 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 FAM81AQ8TBF8 368 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 AQP3Q92482 292 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 H1FXQ92522 213 aaKnown RBP11.06□□□□□ -0.64
CHD3-209ENST00000473376 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 SEH1LQ96EE3 360 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 NRBF2Q96F24 287 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 DUS3LQ96G46 650 aaKnown RBP11.06□□□□□ -0.64
CHD3-209ENST00000473376 MNTQ99583 582 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 PPP1R3EQ9H7J1 279 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 HEXA-AS1Q9H8Q6 139 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 FAM206AQ9NX38 181 aa11.06□□□□□ -0.64
CHD3-209ENST00000473376 NUFIP1Q9UHK0 495 aaKnown RBP11.06□□□□□ -0.64
CHD3-209ENST00000473376 ANKRD61A6NGH8 418 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 VGLL3A8MV65 326 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 GNGT2O14610 69 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 SELENOFO60613 162 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 NDUFB7P17568 137 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 GABRA5P31644 462 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 GPM6AP51674 278 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ACTR3P61158 418 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ELF3P78545 371 aaPredicted RBP11.05□□□□□ -0.64
CHD3-209ENST00000473376 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 SMIM21Q3B7S5 101 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ZNF829Q3KNS6 432 aaPredicted RBP11.05□□□□□ -0.64
CHD3-209ENST00000473376 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 SLC35E4Q6ICL7 350 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 Q6ZSR3 168 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ZNF573Q86YE8 665 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 PDZD9Q8IXQ8 264 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 CFHR4Q92496 578 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 TEAD3Q99594 435 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 FGF23Q9GZV9 251 aaPredicted RBP11.05□□□□□ -0.64
CHD3-209ENST00000473376 MOB1AQ9H8S9 216 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 SNTG1Q9NSN8 517 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ENPP5Q9UJA9 477 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
CHD3-209ENST00000473376 ZNF732B4DXR9 585 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 H0YAE9 185 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 SLC1A7O00341 560 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 DLGAP1O14490 977 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 GSC2O15499 205 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 RHBDL1O75783 438 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 DHRS3O75911 302 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 FAM107AO95990 144 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 RBP4P02753 201 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 CSF1P09603 554 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 T-ENOLP0DO92 83 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 SELLP14151 372 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 POU1F1P28069 291 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 CRIP3Q6Q6R5 217 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 Q6ZTK2 550 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 THAP5Q7Z6K1 395 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 POC1AQ8NBT0 407 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 ZNRF1Q8ND25 227 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 OR51G2Q8NGK0 314 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 CANT1Q8WVQ1 401 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 OR8B4Q96RC9 309 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 SSX3Q99909 188 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 PRRG3Q9BZD7 231 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 TAS2R1Q9NYW7 299 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 DNAJB9Q9UBS3 223 aa11.04□□□□□ -0.64
CHD3-209ENST00000473376 NRASP01111 189 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 MPZP25189 248 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 GABRA2P47869 451 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 EFNB2P52799 333 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 EGR3Q06889 387 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 ACP7Q6ZNF0 438 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 C11orf42Q8N5U0 333 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 OR4C13Q8NGP0 309 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 AJUBAQ96IF1 538 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 PBOV1Q9GZY1 135 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 SEMA6AQ9H2E6 1030 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
CHD3-209ENST00000473376 HES4Q9HCC6 221 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 USE1Q9NZ43 259 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHD3-209ENST00000473376 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
CHD3-209ENST00000473376 FAM90A8PA6NJQ4 464 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 H3BUX3 64 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 J3QT63 122 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 OPN1MWP04001 364 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 PRDX2P32119 198 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 RIDAP52758 137 aaKnown RBP11.02□□□□□ -0.65
CHD3-209ENST00000473376 RPS7P62081 194 aaKnown RBP11.02□□□□□ -0.65
CHD3-209ENST00000473376 RPL31P62899 125 aaKnown RBP11.02□□□□□ -0.65
CHD3-209ENST00000473376 KLRD1Q13241 179 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 APOFQ13790 326 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 CLVS2Q5SYC1 327 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 ZNF684Q5T5D7 378 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
CHD3-209ENST00000473376 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.65
CHD3-209ENST00000473376 TMEM179BQ7Z7N9 219 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms