RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 BCL2L15Q5TBC7 163 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 ATPAF1Q5TC12 328 aaPredicted RBP12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 HAGHLQ6PII5 290 aaPredicted RBP12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 ZNF788Q6ZQV5 615 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 LY6G5BQ8NDX9 201 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 ANGPTL6Q8NI99 470 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 MNTQ99583 582 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 TBX5Q99593 518 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 DCTN5Q9BTE1 182 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 CHIAQ9BZP6 476 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 SLC25A10Q9UBX3 287 aaPredicted RBP12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 ENOPH1Q9UHY7 261 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 R4GMQ9 66 aa12.94□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A0U1RQK1 487 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 OR5B21A6NL26 309 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 OR2AT4A6NND4 320 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 GPR37O15354 613 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 SIGLEC5O15389 551 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 SRSF10O75494 262 aaKnown RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 MTRF1O75570 445 aaKnown RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 CIB2O75838 187 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 CRYBA1P05813 215 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 ACTR3P61158 418 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 EFNB1P98172 346 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 ZNF684Q5T5D7 378 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 ZBTB37Q5TC79 503 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 KRT74Q7RTS7 529 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 OR5A2Q8NGI9 324 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 DUS3LQ96G46 650 aaKnown RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 MED30Q96HR3 178 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 RIBC2Q9H4K1 309 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 ELL3Q9HB65 397 aaPredicted RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 MRM2Q9UI43 246 aaKnown RBP12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 OR52A1Q9UKL2 312 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 CMYA5Q8N3K9 4069 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 DSCAML1Q8TD84 2053 aa12.93□□□□□ -0.34
CCDC88B-205ENST00000472524 IGKV1D-17A0A075B6S4 117 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A1W2PQ09 198 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A1W2PRD5 423 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A1W2PRF3 423 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A1W2PRM7 423 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 A6NIN4 97 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 SAC3D1A6NKF1 404 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 RPP14O95059 124 aaKnown RBP12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 APOL3O95236 402 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 NRASP01111 189 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 ACAA1P09110 424 aaPredicted RBP12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 PSG2P11465 335 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 POLR2IP36954 125 aaKnown RBP12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 EGR3Q06889 387 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 KLRD1Q13241 179 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 TMEM86BQ8N661 226 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 KIR3DL3Q8N743 410 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 YIPF7Q8N8F6 280 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 TMEM185AQ8NFB2 350 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 SSMEM1Q8WWF3 244 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 AQP3Q92482 292 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 ITFG2Q969R8 447 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 ZNF488Q96MN9 340 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 OAZ3Q9UMX2 235 aa12.92□□□□□ -0.34
CCDC88B-205ENST00000472524 H3BSH0 61 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 IGHV4-59P01825 116 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 KRT8P05787 483 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 CAPZA1P52907 286 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 RAG2P55895 527 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 SRSF4Q08170 494 aaKnown RBP12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 CLVS2Q5SYC1 327 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 ELMOD2Q8IZ81 293 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 BATF2Q8N1L9 274 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 Q8N7P7 452 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 ZNRF1Q8ND25 227 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 C8orf46Q8TAG6 207 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 WARS2Q9UGM6 360 aaKnown RBP12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 SLC22A13Q9Y226 551 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 SNX5Q9Y5X3 404 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 POMT1Q9Y6A1 747 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 V9GYS6 101 aa12.91□□□□□ -0.34
CCDC88B-205ENST00000472524 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 SYNGR1O43759 233 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 HTR1FP30939 366 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 HAAOP46952 286 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 CAV3P56539 151 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 GUCA2AQ02747 115 aa12.9□□□□□ -0.34
CCDC88B-205ENST00000472524 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms