RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 TIPRLO75663 272 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 ARG1P05089 322 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 CD33P20138 364 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 CD24P25063 80 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 HOXD3P31249 432 aaPredicted RBP8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 DCTDP32321 178 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 OPRL1P41146 370 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 LGALS4P56470 323 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 DYNC1I2Q13409 638 aaKnown RBP8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 SSX2Q16385 188 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 VAX1Q5SQQ9 334 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 CSNK2A3Q8NEV1 391 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 OR4S1Q8NGB4 309 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 OR10Z1Q8NGY1 313 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 DNAH3Q8TD57 4116 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 RNF133Q8WVZ7 376 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 C12orf43Q96C57 262 aaKnown RBP8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 NMNAT2Q9BZQ4 307 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 MEGF9Q9H1U4 602 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 OPA3Q9H6K4 179 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 GORASP2Q9H8Y8 452 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 MRGBPQ9NV56 204 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 ZNF222Q9UK12 451 aa8.16□□□□□ -1.1
SCAMP3-205ENST00000472397 RIIAD1A6NNX1 92 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 MAGEB4O15481 346 aaPredicted RBP8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 CST4P01036 141 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 MRPL3P09001 348 aaKnown RBP8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 CALCBP10092 127 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 ATP6V1B2P21281 511 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 SLC25A1P53007 311 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 KRTAP10-11P60412 298 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 RPL31P62899 125 aaKnown RBP8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 GNGT1P63211 74 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 TEX30Q5JUR7 227 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 ZNF770Q6IQ21 691 aaPredicted RBP8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 PLBD1Q6P4A8 553 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 RASSF6Q6ZTQ3 369 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 THAP5Q7Z6K1 395 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 C11orf42Q8N5U0 333 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 BBS1Q8NFJ9 593 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 OR5D13Q8NGL4 314 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 NIPSNAP1Q9BPW8 284 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 C1orf21Q9H246 121 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 OR51I2Q9H344 312 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 GPR173Q9NS66 373 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 IL20Q9NYY1 176 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 HILPDAQ9Y5L2 63 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 MPC1Q9Y5U8 109 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 DNAH9Q9NYC9 4486 aa8.15□□□□□ -1.1
SCAMP3-205ENST00000472397 A6NDX4 124 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 TMEM210A6NLX4 147 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 H3BN98 237 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 NDUFAB1O14561 156 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 XPNPEP2O43895 674 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 IFNGP01579 166 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 FAHP16930 419 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 PRDX2P32119 198 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 CAV3P56539 151 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 EMX1Q04741 257 aaPredicted RBP8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 KHDC1LQ5JSQ8 128 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 SAMD4BQ5PRF9 694 aaKnown RBP8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 KRT77Q7Z794 578 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 OR2T33Q8NG76 320 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 OR52H1Q8NGJ2 320 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 AQP3Q92482 292 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 MYLK2Q9H1R3 596 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 HEXA-AS1Q9H8Q6 139 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 IL1RAPQ9NPH3 570 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 ABCB10Q9NRK6 738 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 ARL8BQ9NVJ2 186 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 GTF2A1LQ9UNN4 478 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 TCF19Q9Y242 345 aa8.14□□□□□ -1.11
SCAMP3-205ENST00000472397 FAM172BPA6NC97 362 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 PRR32B1ATL7 298 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 GLCEO94923 617 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 LYNP07948 512 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 CCDC159P0C7I6 412 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 PF4V1P10720 104 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 ZNF3P17036 446 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 CFL1P23528 166 aaKnown RBP8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 VDAC2P45880 294 aaPredicted RBP8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 RPS7P62081 194 aaKnown RBP8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 ESRRGP62508 458 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 CBX1P83916 185 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 SLC34A1Q06495 639 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 CNN3Q15417 329 aaKnown RBP8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 TMEM236Q5W0B7 351 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 BAIAP2L2Q6UXY1 529 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 ACP7Q6ZNF0 438 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 PLEKHG7Q6ZR37 379 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 ASRGL1Q7L266 308 aa8.13□□□□□ -1.11
SCAMP3-205ENST00000472397 ANGPTL5Q86XS5 388 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms