RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NOTOA8MTQ0 251 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 C3orf80F5H4A9 247 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 SPRY1O43609 319 aaPredicted RBP16.27■□□□□ 0.19
PSPC1-203ENST00000471658 CD200P41217 278 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 HAAOP46952 286 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 POU3F4P49335 361 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 ZNF154Q13106 437 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 FAM76BQ5HYJ3 339 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 SFXN4Q6P4A7 337 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 NKAIN3Q8N8D7 197 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 SPERTQ8NA61 448 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 OR4D6Q8NGJ1 314 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 SLC25A46Q96AG3 418 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 CACNG6Q9BXT2 260 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 MS4A5Q9H3V2 200 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 UFSP2Q9NUQ7 469 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 ARFGEF3Q5TH69 2177 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 ANGPTL7O43827 346 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 ADH4P08319 380 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 CDKN1AP38936 164 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 ZP1P60852 638 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 P2RY14Q15391 338 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 C1orf100Q5SVJ3 147 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 HAGHLQ6PII5 290 aaPredicted RBP16.26■□□□□ 0.19
PSPC1-203ENST00000471658 ZNF826PQ6ZT77 177 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 C11orf53Q8IXP5 236 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 BATF2Q8N1L9 274 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 SLC25A28Q96A46 364 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 PLGRKTQ9HBL7 147 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 NEK6Q9HC98 313 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 C14orf119Q9NWQ9 140 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 NKIRAS2Q9NYR9 191 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 TREM2Q9NZC2 230 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
PSPC1-203ENST00000471658 NOP16Q9Y3C1 178 aaKnown RBP16.26■□□□□ 0.19
PSPC1-203ENST00000471658 IFITM5A6NNB3 132 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 TPD52L2O43399 206 aaKnown RBP16.25■□□□□ 0.19
PSPC1-203ENST00000471658 SYNGR1O43759 233 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 PMELP40967 661 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 PPOXP50336 477 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 HOXA4Q00056 320 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-203ENST00000471658 CNPY1Q3B7I2 92 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 IDNKQ5T6J7 187 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 TGIF2LYQ8IUE0 185 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 SCCPDHQ8NBX0 429 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 TNFAIP8L1Q8WVP5 186 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 KCNK15Q9H427 330 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 IL19Q9UHD0 177 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 FBN2P35556 2912 aa16.25■□□□□ 0.19
PSPC1-203ENST00000471658 CELSR2Q9HCU4 2923 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 SLC17A2O00624 439 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 CDIPTO14735 213 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 RHBDL1O75783 438 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 CD55P08174 381 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 TMEM225BP0DP42 221 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 TNFSF4P23510 183 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 PTGFRP43088 359 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 PSMD7P51665 324 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 PDZK1IP1Q13113 114 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 CDH26Q8IXH8 852 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 FOXRED1Q96CU9 486 aaPredicted RBP16.24■□□□□ 0.19
PSPC1-203ENST00000471658 DIRC2Q96SL1 478 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 ING4Q9UNL4 249 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 PMF1-BGLAPU3KQ54 211 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 CACNA1DQ01668 2161 aa16.24■□□□□ 0.19
PSPC1-203ENST00000471658 IGKV1-12A0A0C4DH73 117 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 LRP5LA4QPB2 252 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 TMEM210A6NLX4 147 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 PAHP00439 452 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 IGKV1D-12P01611 117 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 HPXP02790 462 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 HTR2CP28335 458 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SSTR2P30874 369 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SRP9P49458 86 aaKnown RBP16.23■□□□□ 0.19
PSPC1-203ENST00000471658 RORCP51449 518 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 C20orf204Q6ZNR8 217 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SLC25A26Q70HW3 274 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 MOGAT3Q86VF5 341 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 ZNF573Q86YE8 665 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 IGFBPL1Q8WX77 278 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 AQP3Q92482 292 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 ZNF488Q96MN9 340 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SORCS2Q96PQ0 1159 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 UQCC2Q9BRT2 126 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 DECR2Q9NUI1 292 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 C1orf123Q9NWV4 160 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 MRPS28Q9Y2Q9 187 aaKnown RBP16.23■□□□□ 0.19
PSPC1-203ENST00000471658 A6NLC8 198 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 AIPO00170 330 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 NDUFS7O75251 213 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 PTBP3O95758 552 aaKnown RBP16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SNRPBP14678 240 aaKnown RBP16.23■□□□□ 0.19
PSPC1-203ENST00000471658 RAB11BQ15907 218 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 GLIPR1L1Q6UWM5 242 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 CELF2-AS1Q8N7Q2 184 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 OR51D1Q8NGF3 324 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 OR6M1Q8NGM8 313 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 SLAMF9Q96A28 289 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 TLNRD1Q9H1K6 362 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms