RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DYDC1Q8WWB3 177 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OTULINQ96BN8 352 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SGK3Q96BR1 496 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 KCNJ15Q99712 375 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SH3GL1Q99961 368 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 CCDC28BQ9BUN5 200 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OR10A2Q9H208 303 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 MRPL22Q9NWU5 206 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF256Q9Y2P7 627 aaPredicted RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 FAM32AQ9Y421 112 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 LYSTQ99698 3801 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 TMEM210A6NLX4 147 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF732B4DXR9 585 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF878C9JN71 531 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF593O00488 134 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 PTP4A3O75365 173 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 INMTO95050 263 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 DIRAS1O95057 198 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 GYPBP06028 91 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 H1F0P07305 194 aaKnown RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 PSKH1P11801 424 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 PRDX2P32119 198 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 BRS3P32247 399 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 SLC15A1P46059 708 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR3A4PP47883 348 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 MRPL19P49406 292 aaKnown RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF121P58317 390 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 FXYD6P3P58550 94 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 SF3A3Q12874 501 aaKnown RBP eCLIP5.47□□□□□ -1.532e-7■■■■■ 27.2
HDAC1-204ENST00000471488 IL18R1Q13478 541 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 RBM39Q14498 530 aaKnown RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 SNAPC1Q16533 368 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF260Q3ZCT1 412 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 LDLRAD2Q5SZI1 272 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 C9orf66Q5T8R8 295 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 HAGHLQ6PII5 290 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR2W3Q7Z3T1 314 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZDHHC23Q8IYP9 409 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OSR2Q8N2R0 312 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR2T12Q8NG77 320 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR5M8Q8NGP6 311 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF671Q8TAW3 534 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR5P3Q8WZ94 311 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 ISOC1Q96CN7 298 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 RBMXL1Q96E39 390 aaKnown RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 HSH2DQ96JZ2 352 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 NOL4LQ96MY1 436 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-204ENST00000471488 OR52D1Q9H346 318 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 MPC1Q9Y5U8 109 aa5.47□□□□□ -1.53
HDAC1-204ENST00000471488 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 DNAH7Q8WXX0 4024 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 TRBV4-1A0A0J9YWV2 114 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 hCG_38984A0A1B0GV85 526 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FAM90A8PA6NJQ4 464 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SERPINE3A8MV23 424 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FAM220BPB1ANY3 271 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 CCL24O00175 119 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 MRASO14807 208 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 DNAJC8O75937 253 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 NXPH2O95156 264 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 TXNDC12O95881 172 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SERPINA1P01009 418 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 H2BFMP0C1H6 154 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 IGHV1-8P0DP01 117 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 CFL1P23528 166 aaKnown RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 HTR1DP28221 377 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 CHATP28329 748 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FMO3P31513 532 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ARHGDIBP52566 201 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 GRB2P62993 217 aaKnown RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SLC35B1P78383 322 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 HES1Q14469 280 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 KRT72Q14CN4 511 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SEC23BQ15437 767 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SNCBQ16143 134 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 SMIM21Q3B7S5 101 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 PLCXD3Q63HM9 321 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ZNF626Q68DY1 528 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 LCN8Q6JVE9 175 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 PLBD1Q6P4A8 553 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 LCNL1Q6ZST4 164 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 MOB3CQ70IA8 216 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 GDPD3Q7L5L3 318 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 TRAPPC6BQ86SZ2 158 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ZBTB46Q86UZ6 589 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ZNF695Q8IW36 515 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ZNF561Q8N587 486 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 CD177Q8N6Q3 437 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FAM86B1Q8N7N1 296 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 ZNF511Q8NB15 262 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FAM156AQ8NDB6 213 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 FAM162AQ96A26 154 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 RAX2Q96IS3 184 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 GPX7Q96SL4 187 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 TLNRD1Q9H1K6 362 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 PAPOLBQ9NRJ5 636 aaKnown RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 TBC1D23Q9NUY8 699 aa5.46□□□□□ -1.54
HDAC1-204ENST00000471488 GMPR2Q9P2T1 348 aaKnown RBP5.46□□□□□ -1.54
HDAC1-204ENST00000471488 KCNG2Q9UJ96 466 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms