RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 WDR82Q6UXN9 313 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TPRA1Q86W33 373 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ZDHHC23Q8IYP9 409 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 GCSAMQ8N6F7 178 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 CELF2-AS1Q8N7Q2 184 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SCCPDHQ8NBX0 429 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM104Q8NE00 496 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 OR5D14Q8NGL3 314 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 OR13G1Q8NGZ3 307 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 Q8TCH9 128 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 NPRL2Q8WTW4 380 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TSEN15Q8WW01 171 aaKnown RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SPSB1Q96BD6 273 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF488Q96MN9 340 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 KCTD7Q96MP8 289 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SOSTQ9BQB4 213 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ADAT1Q9BUB4 502 aaKnown RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 PAPOLGQ9BWT3 736 aaKnown RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 DCSTAMPQ9H295 470 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TPK1Q9H3S4 243 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 VCX3AQ9NNX9 186 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 EXOSC4Q9NPD3 245 aaKnown RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 FBLN5Q9UBX5 448 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 OR5V1Q9UGF6 321 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 USF3Q68DE3 2245 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ABCA12Q86UK0 2595 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 NOTOA8MTQ0 251 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF732B4DXR9 585 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 LYNX1G3V0Z9 82 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 SPRY3O43610 288 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 ARL6IP5O75915 188 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 KDM4BO94953 1096 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 LYNX1P0DP58 116 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 RAB3AP20336 220 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 BDKRB2P30411 391 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 CDKN1AP38936 164 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 CLDN12P56749 244 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 MXD1Q05195 221 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 FAM201AQ5SY85 155 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 PLCXD3Q63HM9 321 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 SIGIRRQ6IA17 410 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 SFXN4Q6P4A7 337 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 METAP1DQ6UB28 335 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM200AQ86VY9 491 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 TRMT10AQ8TBZ6 339 aaKnown RBP8.32□□□□□ -1.08
SF3A1-207ENST00000471342 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 RFT1Q96AA3 541 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 RNF170Q96K19 258 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 OR2V2Q96R30 315 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 NRIP2Q9BQI9 281 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 WDR13Q9H1Z4 485 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 CXXC4Q9H2H0 198 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 IL19Q9UHD0 177 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 ZDHHC8Q9ULC8 765 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 V9GY05 133 aa8.32□□□□□ -1.08
SF3A1-207ENST00000471342 ASH1LQ9NR48 2969 aaKnown RBP8.31□□□□□ -1.08
SF3A1-207ENST00000471342 A0A096LNT2 108 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 OR5B21A6NL26 309 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ANKRD30BLA7E2S9 258 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 M0R233 179 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 AIPO00170 330 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 CDIPTO14735 213 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 WNT9BO14905 357 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 SPRY1O43609 319 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-207ENST00000471342 IGHV4-39P01824 125 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 TFF1P04155 84 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 PGA5P0DJD9 388 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF20P17024 532 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 RAB3BP20337 219 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 MAPK3P27361 379 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-207ENST00000471342 PTGFRP43088 359 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 SERPINB10P48595 397 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM50BP56557 158 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 GNG3P63215 75 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 CCL8P80075 99 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 IL24Q13007 206 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 OR8G1Q15617 311 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF181Q2M3W8 571 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 TIMM50Q3ZCQ8 353 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 FAM209AQ5JX71 171 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 UNQ6126/PRO20091Q6UXV3 157 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 Q6ZPA2 131 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 COMMD2Q86X83 199 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 PXT1Q8NFP0 134 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 OR2Z1Q8NG97 314 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ELMOD3Q96FG2 381 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 CACNG6Q9BXT2 260 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 PKIBQ9C010 78 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 FAM192AQ9GZU8 254 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms