RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CDC20Q12834 499 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ATP6AP1Q15904 470 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 PDZK1Q5T2W1 519 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 MRPL2Q5T653 305 aaKnown RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 SLC22A10Q63ZE4 541 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OR2T5Q6IEZ7 315 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 NIPAL3Q6P499 406 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF730Q6ZMV8 503 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 C16orf47Q6ZP98 133 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OLIG3Q7RTU3 272 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF550Q7Z398 422 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 GALNT10Q86SR1 603 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 RANBP3LQ86VV4 465 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM156Q8N614 296 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OR2T29Q8NH02 315 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 GPR148Q8TDV2 347 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 PAQR8Q8TEZ7 354 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 RNF138Q8WVD3 245 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 HGDQ93099 445 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 NRBF2Q96F24 287 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ARHGDIGQ99819 225 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 OSBPL10Q9BXB5 764 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 TBL1XR1Q9BZK7 514 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ING2Q9H160 280 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 EXOSC3Q9NQT5 275 aaKnown RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 C8orf4Q9NR00 106 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF275Q9NSD4 429 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-202ENST00000471307 V9GYQ6 96 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 CACNA1AO00555 2505 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 EXPH5Q8NEV8 1989 aa3.87□□□□□ -1.79
CCDC39-202ENST00000471307 FREM2Q5SZK8 3169 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 DMXL2Q8TDJ6 3036 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ANKRD11Q6UB99 2663 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 EML6Q6ZMW3 1958 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 IGLV3-32A0A0A0MS00 114 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 NPIPA5A0A0B4J1W7 369 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 A0A0U1RQV5 110 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ARGFXA6NJG6 315 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 CLDN24A6NM45 220 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RNF212BA8MTL3 300 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 NPIPA7E9PJI5 369 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 hCG_2039718K7EN88 272 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 FAAHO00519 579 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 FFAR1O14842 300 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 LANCL1O43813 399 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ICOSLGO75144 302 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 OR5F1O95221 314 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 EPPINO95925 133 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 P04436 131 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 UBTFL6P0CB48 400 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 NPIPA8P0DM63 369 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 DBTP11182 482 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 PGCP20142 388 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RRM2P31350 389 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 EVI2BP34910 448 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 PTGFRP43088 359 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 P2RX1P51575 399 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 CCR4P51679 360 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF136P52737 540 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 UCNP55089 124 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RGS8P57771 180 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 COPZ1P61923 177 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 MFGE8Q08431 387 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ST3GAL3Q11203 375 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 SKP2Q13309 424 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 DGCR6Q14129 220 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 SNCBQ16143 134 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 SSX2Q16385 188 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 DEFB109BQ30KR1 87 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ULK3Q6PHR2 472 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 APOOLQ6UXV4 268 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RTL4Q6ZR62 310 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ERASQ7Z444 233 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 TSEN54Q7Z6J9 526 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 HMGN2P46Q86SG4 172 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 MARCH3Q86UD3 253 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 RBM45Q8IUH3 476 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 SVOPLQ8N434 492 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 LINC00471Q8N535 108 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 GVQW1Q8N7I0 195 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 CATSPER1Q8NEC5 780 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 OR10G3Q8NGC4 313 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 OR4D11Q8NGI4 311 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 OR5W2Q8NH69 310 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 OR5K1Q8NHB7 308 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 AKR7LQ8NHP1 331 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 PHF10Q8WUB8 498 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 DNAJA4Q8WW22 397 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM37Q8WXS4 190 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM45BQ96B21 275 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 PRRC1Q96M27 445 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 MCHR1Q99705 422 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 UTP23Q9BRU9 249 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 C9orf16Q9BUW7 83 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ANGPTL4Q9BY76 406 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 MRPL13Q9BYD1 178 aaKnown RBP3.86□□□□□ -1.79
CCDC39-202ENST00000471307 VCX3BQ9H321 246 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF665Q9H7R5 613 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms