RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZNF20P17024 532 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 DVL1P1P54792 670 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-220ENST00000471235 DOC2BQ14184 412 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 SFRP4Q6FHJ7 346 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-220ENST00000471235 DCDC5Q6ZRR9 648 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 TRMT10AQ8TBZ6 339 aaKnown RBP16.52■□□□□ 0.24
HDAC7-220ENST00000471235 NPRL2Q8WTW4 380 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 PP6455Q8WZ26 134 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 FGGYQ96C11 551 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF184Q99676 751 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-220ENST00000471235 TRIM36Q9NQ86 728 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 BABAM2Q9NXR7 383 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 IGHV3OR15-7A0A075B7D8 119 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 PTGES3LE9PB15 166 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 OGG1O15527 345 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 PLPP2O43688 288 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
HDAC7-220ENST00000471235 RHBDL1O75783 438 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 SLC35A2P78381 396 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 TEX36Q5VZQ5 186 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 HAGHLQ6PII5 290 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-220ENST00000471235 LYPD2Q6UXB3 125 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 GLCCI1Q86VQ1 547 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 FAM90A1Q86YD7 464 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 AQP3Q92482 292 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 SMIM19Q96E16 107 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 TECTBQ96PL2 329 aa16.51■□□□□ 0.23
HDAC7-220ENST00000471235 TRAV38-1A0A0B4J264 116 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 J3QT63 122 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 WNT2P09544 360 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 WNT4P56705 351 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 CNN3Q15417 329 aaKnown RBP16.5■□□□□ 0.23
HDAC7-220ENST00000471235 RNLSQ5VYX0 342 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 UTS2BQ765I0 119 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 NANOGP1Q8N7R0 232 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 ZFP41Q8N8Y5 198 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 TSEN15Q8WW01 171 aaKnown RBP16.5■□□□□ 0.23
HDAC7-220ENST00000471235 MYDGFQ969H8 173 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 TMEM186Q96B77 213 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 NEIL1Q96FI4 390 aaPredicted RBP16.5■□□□□ 0.23
HDAC7-220ENST00000471235 TMEM160Q9NX00 188 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 MIOXQ9UGB7 285 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 LRCH1Q9Y2L9 728 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 TPRKBQ9Y3C4 175 aa16.5■□□□□ 0.23
HDAC7-220ENST00000471235 TRAV20A0A0B4J274 112 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 IGKV1-9A0A0C4DH69 117 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 FAM230AA0A1W2PPH8 454 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 KIAA1324LA8MWY0 1029 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-220ENST00000471235 A8MXK9 166 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 AKR7A2O43488 359 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 RPSAP08865 295 aaKnown RBP16.49■□□□□ 0.23
HDAC7-220ENST00000471235 CRHBPP24387 322 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 HAAOP46952 286 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 GMFBP60983 142 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 LCN2P80188 198 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 KCNJ8Q15842 424 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 ESCO2Q56NI9 601 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 DMKNQ6E0U4 476 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-220ENST00000471235 ZNF573Q86YE8 665 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 OR8B3Q8NGG8 313 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 SEH1LQ96EE3 360 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 OR8B2Q96RD0 313 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 CDCA4Q9BXL8 241 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 WDR13Q9H1Z4 485 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 DUSP21Q9H596 190 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 HIF1ANQ9NWT6 349 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 CTSZQ9UBR2 303 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 DHDHQ9UQ10 334 aa16.49■□□□□ 0.23
HDAC7-220ENST00000471235 IGKV1-27A0A075B6S5 117 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 TNFRSF13BO14836 293 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-220ENST00000471235 SYNGR1O43759 233 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 FOXH1O75593 365 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 SERPINA3P01011 423 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 GYPAP02724 150 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 MUC1P15941 1255 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-220ENST00000471235 ATF1P18846 271 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 ZFP36P26651 326 aaKnown RBP16.48■□□□□ 0.23
HDAC7-220ENST00000471235 TAS2R43P59537 309 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 IRF3Q14653 427 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 CALHM1Q8IU99 346 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 OR13C9Q8NGT0 318 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 PGLYRP3Q96LB9 341 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 MND1Q9BWT6 205 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 ERGIC3Q9Y282 383 aa16.48■□□□□ 0.23
HDAC7-220ENST00000471235 PHF1O43189 567 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-220ENST00000471235 ADAM20O43506 726 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 MT-ND2P03891 347 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 CPT2P23786 658 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 MPZP25189 248 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 AZGP1P25311 298 aaKnown RBP16.47■□□□□ 0.23
HDAC7-220ENST00000471235 PITPNBP48739 271 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 FUT6P51993 359 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 MICBQ29980 383 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 CR1LQ2VPA4 569 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 RBM48Q5RL73 367 aaKnown RBP16.47■□□□□ 0.23
HDAC7-220ENST00000471235 STUMQ69YW2 141 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 NLRC3Q7RTR2 1065 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 ANGPTL5Q86XS5 388 aa16.47■□□□□ 0.23
HDAC7-220ENST00000471235 PARP16Q8N5Y8 322 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms