RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 DPPA2Q7Z7J5 298 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MARCH3Q86UD3 253 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TGIF2LXQ8IUE1 241 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF100Q8IYN0 542 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 UBE2J2Q8N2K1 259 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 RIBC1Q8N443 379 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ANKFN1Q8N957 763 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 AQP11Q8NBQ7 271 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR7G2Q8NG99 324 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR4F15Q8NGB8 312 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR10A7Q8NGE5 316 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR8J2Q8NGG1 315 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR9A2Q8NGT5 310 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR4F5Q8NH21 305 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR2V1Q8NHB1 315 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 PIGXQ8TBF5 258 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MIPOL1Q8TD10 442 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SFXN5Q8TD22 340 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MAGEE2Q8TD90 523 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZFP90Q8TF47 636 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 AENQ8WTP8 325 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 IFT81Q8WYA0 676 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR5P2Q8WZ92 322 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 C11orf52Q96A22 123 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EXOSC8Q96B26 276 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 APH1AQ96BI3 265 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ATF6BQ99941 703 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CHCHD5Q9BSY4 110 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MCRIP2Q9BUT9 160 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 BEX2Q9BXY8 128 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 RAB1BQ9H0U4 201 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 GLIPR2Q9H4G4 154 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MEAF6Q9HAF1 191 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ELOVL3Q9HB03 270 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CACYBPQ9HB71 228 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 IL1RAPQ9NPH3 570 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EXOSC3Q9NQT5 275 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TUBG2Q9NRH3 451 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 KLHL28Q9NXS3 571 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CALML5Q9NZT1 146 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MED11Q9P086 117 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM216Q9P0N5 145 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 PSMC3IPQ9P2W1 217 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MBD2Q9UBB5 411 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF346Q9UL40 294 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CLEC4AQ9UMR7 237 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 GSTK1Q9Y2Q3 226 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 KLHDC2Q9Y2U9 406 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EXOSC1Q9Y3B2 195 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 FBXO7Q9Y3I1 522 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EXPH5Q8NEV8 1989 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CHD3Q12873 2000 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 UTP20O75691 2785 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ABCA1O95477 2261 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 IGHV3-38A0A0C4DH36 116 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 A0A0J9YW62 118 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CIB4A0PJX0 185 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 FAM74A7A6NL05 159 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 A8MXK9 166 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 H0YC42 278 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 K7EQG2 157 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 COPEO14579 308 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 IMPA2O14732 288 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 BIRC5O15392 142 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 IDH3BO43837 385 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SH3BGRLO75368 114 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 GCM2O75603 506 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 UGT2B17O75795 530 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 AQP8O94778 261 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 KRT75O95678 551 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 PTHP01270 115 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 HMGN2P05204 90 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 IL6P05231 212 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 H2BFMP0C1H6 154 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ACADSP16219 412 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SDC1P18827 310 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 COX5AP20674 150 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 USF1P22415 310 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 UQCRC2P22695 453 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 AGTR1P30556 359 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ARR3P36575 388 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ARHGDIAP52565 204 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SLC18A1P54219 525 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CLDN8P56748 225 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM33P57088 247 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ACTR3P61158 418 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 COPZ1P61923 177 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 RPL23AP62750 156 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 HPCAP84074 193 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 EMX2Q04743 252 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 CAPRIN1Q14444 709 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 STK11Q15831 433 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 SYPL1Q16563 259 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF239Q16600 458 aaKnown RBP2.06□□□□□ -2.08
UBXN4-206ENST00000470687 MAJINQ3KP22 176 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 FAM74A3Q4VXF1 159 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 FBXO48Q5FWF7 155 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 OR5M10Q6IEU7 315 aa2.06□□□□□ -2.08
UBXN4-206ENST00000470687 PAQR6Q6TCH4 344 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms