RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGHV3-64DA0A0J9YX35 117 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 A6NIN4 97 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF732B4DXR9 585 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 IRF2P14316 349 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 CPEP16870 476 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF529Q6P280 563 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 C11orf53Q8IXP5 236 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 MS4A15Q8N5U1 240 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR5D14Q8NGL3 314 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 RAB1CQ92928 201 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 OPALINQ96PE5 141 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 TREM2Q9NZC2 230 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 SLC7A11Q9UPY5 501 aa12.57□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 A6NLC8 198 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 SULT1B1O43704 296 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 GRPP07492 148 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 ATF1P18846 271 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 FSTP19883 344 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 PRKACBP22694 351 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 MPZP25189 248 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 PSMA1P25786 263 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 MAPK3P27361 379 aaPredicted RBP12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 FUT6P51993 359 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 BTG1P62324 171 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 KCTD8Q6ZWB6 473 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR10Z1Q8NGY1 313 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 REG4Q9BYZ8 158 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZCCHC4Q9H5U6 513 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 UFSP2Q9NUQ7 469 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 WIPI2Q9Y4P8 454 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 NPTNQ9Y639 398 aa12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-203ENST00000470278 TRBV5-7A0A0A0MS05 114 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 RNF223E7ERA6 249 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 CDIPTO14735 213 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 GPX5O75715 221 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 SC5DO75845 299 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 LHBP01229 141 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 HSMCR30P0CW71 290 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 USF1P22415 310 aaPredicted RBP12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 TRAM1Q15629 374 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 TMEM155Q4W5P6 130 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 LIPKQ5VXJ0 399 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 LHFPL2Q6ZUX7 228 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 AQP3Q92482 292 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 RPL3LQ92901 407 aaKnown RBP12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 OR14A2Q96R54 314 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 NR1H4Q96RI1 486 aaPredicted RBP12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 PKIBQ9C010 78 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 hCG_1807616A0A1W2PRN6 198 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF879B4DU55 563 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 J3QT63 122 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 CYB5R3P00387 301 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 GABRA5P31644 462 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 HAAOP46952 286 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 SOX2P48431 317 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 RBP2P50120 134 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 IL24Q13007 206 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZMYND11Q15326 602 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
CDC42SE1-203ENST00000470278 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 PPIAL4EA0A075B759 164 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 A0A087WXM4 84 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
CDC42SE1-203ENST00000470278 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms