RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 OR6K6Q8NGW6 343 aa15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 MRGBPQ9NV56 204 aa15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 RFPL4AA6NLU0 287 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 RFPL4AL1F8VTS6 287 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 GADD45GO95257 159 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 GYPBP06028 91 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 JUNBP17275 347 aaPredicted RBP15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 IFNGR2P38484 337 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 DGCR2P98153 550 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 SF3A3Q12874 501 aaKnown RBP eCLIP15.19■□□□□ 0.026e-6■■□□□ 14.4
NCKIPSD-209ENST00000470006 ZNF273Q14593 569 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 MRPL41Q8IXM3 137 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 SLC15A3Q8IY34 581 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR51D1Q8NGF3 324 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 TFAP2CQ92754 450 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 RCN3Q96D15 328 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 ASCL2Q99929 193 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 MCRIP2Q9BUT9 160 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 FGF23Q9GZV9 251 aaPredicted RBP15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 RGCCQ9H4X1 137 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZNF319Q9P2F9 582 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 BIRC6Q9NR09 4857 aa15.19■□□□□ 0.02
NCKIPSD-209ENST00000470006 EPPK1P58107 5090 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 RYR2Q92736 4967 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZNF732B4DXR9 585 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 CST4P01036 141 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 ACKR3P25106 362 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 DCTDP32321 178 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 SMIM11AP58511 58 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZNF561Q8N587 486 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 CD177Q8N6Q3 437 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 NDNFQ8TB73 568 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 HPSE2Q8WWQ2 592 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 EGLN3Q9H6Z9 239 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 STAB2Q8WWQ8 2551 aa15.18■□□□□ 0.02
NCKIPSD-209ENST00000470006 EDF1O60869 148 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 LPLP06858 475 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 AZGP1P25311 298 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 PRDX2P32119 198 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 DYNLT3P51808 116 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 GNG3P63215 75 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 SMIM21Q3B7S5 101 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 CEP78Q5JTW2 689 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 C10orf99Q6UWK7 81 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 SLC37A3Q8NCC5 494 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 FAM81AQ8TBF8 368 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 GNPDA2Q8TDQ7 276 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 AKR1E2Q96JD6 320 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 FUZQ9BT04 418 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 RASL12Q9NYN1 266 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 CD300AQ9UGN4 299 aa15.17■□□□□ 0.02
NCKIPSD-209ENST00000470006 MEX3AA1L020 520 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 ODF3BA8MYP8 253 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 SLC22A2O15244 555 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 MTRF1O75570 445 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 H2BFMP0C1H6 154 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 CEBPDP49716 269 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 NUDT2P50583 147 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 ABCA11PQ4W5N1 156 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 TEX30Q5JUR7 227 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 LDLRAD2Q5SZI1 272 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 CASC10Q5T4H9 136 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZNF626Q68DY1 528 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 KCTD18Q6PI47 426 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 HAGHLQ6PII5 290 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 ACP7Q6ZNF0 438 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 PRSS45Q7RTY3 260 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 CALHM1Q8IU99 346 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR6N2Q8NGY6 317 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 MUC7Q8TAX7 377 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 KCTD14Q9BQ13 255 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR51I2Q9H344 312 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 V9GYQ6 96 aa15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 DYNC2H1Q8NCM8 4307 aaKnown RBP15.16■□□□□ 0.02
NCKIPSD-209ENST00000470006 NME4O00746 187 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZFPL1O95159 310 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 CBX1P83916 185 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 C9orf152Q5JTZ5 239 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 LCN8Q6JVE9 175 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 ERI1Q8IV48 349 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR11H6Q8NGC7 330 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 STMN2Q93045 179 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 C7orf34Q96L11 122 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 ZNF488Q96MN9 340 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 ABHD6Q9BV23 337 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 GAR1Q9NY12 217 aaKnown RBP15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR14J1Q9UGF5 321 aa15.15■□□□□ 0.02
NCKIPSD-209ENST00000470006 C17orf98A8MV24 154 aa15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 CLUP10909 449 aa15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 GSSP48637 474 aa15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 TSPAN31Q12999 210 aa15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 ZNF770Q6IQ21 691 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 BCAS4Q8TDM0 211 aa15.14■□□□□ 0.01
NCKIPSD-209ENST00000470006 RNF133Q8WVZ7 376 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms