RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C1orf21Q9H246 121 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 PPA2Q9H2U2 334 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 MMP27Q9H306 513 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 METTL8Q9H825 291 aaKnown RBP10.86□□□□□ -0.67
CPSF4-210ENST00000469897 FAM206AQ9NX38 181 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
CPSF4-210ENST00000469897 ANKRD61A6NGH8 418 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 ACOD1A6NK06 481 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 PRR32B1ATL7 298 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TSPAN9O75954 239 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TGFBR2P37173 567 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 CBX1P83916 185 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 ACSM1Q08AH1 577 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 RIPPLY1Q0D2K3 151 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 HAGHLQ6PII5 290 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-210ENST00000469897 DEGS2Q6QHC5 323 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 KRT74Q7RTS7 529 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TRPM8Q7Z2W7 1104 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 SPATA24Q86W54 205 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 FAM185AQ8N0U4 392 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TMEM185AQ8NFB2 350 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 FAM110DQ8TAY7 271 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-210ENST00000469897 UBE2FQ969M7 185 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF488Q96MN9 340 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TEX12Q9BXU0 123 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 MROQ9BYG7 248 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 TTTY10Q9BZA0 68 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 GPR84Q9NQS5 396 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 PIGLQ9Y2B2 252 aa10.85□□□□□ -0.67
CPSF4-210ENST00000469897 SF3B6Q9Y3B4 125 aaKnown RBP10.85□□□□□ -0.67
CPSF4-210ENST00000469897 A0A0U1RQV5 110 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 CCDC182A6NF36 153 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 MAGEB4O15481 346 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-210ENST00000469897 PAX6P26367 422 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 CAPZA1P52907 286 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 CRISP1P54107 249 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 EGR3Q06889 387 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 PLCXD3Q63HM9 321 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 NCR3LG1Q68D85 454 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 BCDIN3DQ7Z5W3 292 aaKnown RBP10.84□□□□□ -0.67
CPSF4-210ENST00000469897 ZNF679Q8IYX0 411 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 OR5R1Q8NH85 324 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 RORBQ92753 470 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 SSX3Q99909 188 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 C19orf12Q9NSK7 152 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 RASL12Q9NYN1 266 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 DNAJB9Q9UBS3 223 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
CPSF4-210ENST00000469897 SLC22A31A6NKX4 558 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 OR5B21A6NL26 309 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 RFPL4AA6NLU0 287 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 RFPL4AL1F8VTS6 287 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 GYG2O15488 501 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 FKBP6O75344 327 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 ZNF254O75437 659 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 TSPAN15O95858 294 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 NRASP01111 189 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 IGLV3-1P01715 115 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 ATP6V1B1P15313 513 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 FAHP16930 419 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 PRDX2P32119 198 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 ROM1Q03395 351 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
CPSF4-210ENST00000469897 LY6EQ16553 131 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 TMEM200BQ69YZ2 307 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 HIST2H2BDQ6DRA6 164 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 MKXQ8IYA7 352 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 BATF2Q8N1L9 274 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 CD177Q8N6Q3 437 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 BEND2Q8NDZ0 799 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 OR4M1Q8NGD0 313 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 OR5D13Q8NGL4 314 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 PPP1R35Q8TAP8 253 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 OR8B4Q96RC9 309 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 APOL4Q9BPW4 351 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 IKZF2Q9UKS7 526 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 GTF2A1LQ9UNN4 478 aa10.83□□□□□ -0.68
CPSF4-210ENST00000469897 A6NIN4 97 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 H3BUX3 64 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 SYNGR1O43759 233 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 ANGPTL7O43827 346 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 PRKYO43930 277 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 HOXB6P17509 224 aaKnown RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 CEBPDP49716 269 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 DAPP51397 102 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 RIDAP52758 137 aaKnown RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 MFGE8Q08431 387 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 FLOT2Q14254 428 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 ACP7Q6ZNF0 438 aa10.82□□□□□ -0.68
CPSF4-210ENST00000469897 MEPCEQ7L2J0 689 aaKnown RBP10.82□□□□□ -0.68
CPSF4-210ENST00000469897 C1QL4Q86Z23 238 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms