RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OR56B1Q8NGI3 324 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 OR1J1Q8NGS3 322 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 HPSE2Q8WWQ2 592 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 S100PBPQ96BU1 408 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 NEURL2Q9BR09 285 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 NUDT16L1Q9BRJ7 211 aaKnown RBP15.59■□□□□ 0.09
SMC4-211ENST00000469858 METTL9Q9H1A3 318 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 SCPEP1Q9HB40 452 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 SLC25A15Q9Y619 301 aa15.59■□□□□ 0.09
SMC4-211ENST00000469858 ANKRD30BLA7E2S9 258 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 MSTNO14793 375 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 HTR3BO95264 441 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 CSF1P09603 554 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 ALKBH2Q6NS38 261 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 STEAP2Q8NFT2 490 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 RAB3CQ96E17 227 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 MARVELD1Q9BSK0 173 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 CACNG6Q9BXT2 260 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 MCUBQ9NWR8 336 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 TAS2R8Q9NYW2 309 aa15.58■□□□□ 0.09
SMC4-211ENST00000469858 IGLV1-44P01699 117 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 CSTBP04080 98 aaKnown RBP15.58■□□□□ 0.08
SMC4-211ENST00000469858 GTF2F2P13984 249 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 GPM6AP51674 278 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 ACTBP60709 375 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 ACTG1P63261 375 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 PDZK1IP1Q13113 114 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 FBXW12Q6X9E4 464 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 CALHM1Q8IU99 346 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 SLC25A40Q8TBP6 338 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 FGF23Q9GZV9 251 aaPredicted RBP15.58■□□□□ 0.08
SMC4-211ENST00000469858 NUDT15Q9NV35 164 aa15.58■□□□□ 0.08
SMC4-211ENST00000469858 HEATR1Q9H583 2144 aaKnown RBP15.58■□□□□ 0.08
SMC4-211ENST00000469858 A0A0B4J293 547 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 IGHV1-18A0A0C4DH31 117 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 PQLC2LA1A4F0 135 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 A8MXE2 369 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 ZNF35P13682 527 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 PSMB1P20618 241 aaKnown RBP15.57■□□□□ 0.08
SMC4-211ENST00000469858 RAB25P57735 213 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 CEACAM21Q3KPI0 293 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 PLAC9Q5JTB6 97 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 TIMM23BQ5SRD1 257 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 OLFML2AQ68BL7 652 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 SFRP4Q6FHJ7 346 aaPredicted RBP15.57■□□□□ 0.08
SMC4-211ENST00000469858 ZNF554Q86TJ5 538 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 FJX1Q86VR8 437 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 NUDCD2Q8WVJ2 157 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 CREB3L1Q96BA8 519 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 CHD8Q9HCK8 2581 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 ESPL1Q14674 2120 aa15.57■□□□□ 0.08
SMC4-211ENST00000469858 TRAV6A0A075B6T7 132 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 IGKV1-12A0A0C4DH73 117 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 NAP1L6A6NFF2 107 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 INMT-MINDY4F8WBC2 141 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 IGKV1D-12P01611 117 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 TCRBP04435 133 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 HIST1H1DP16402 221 aaKnown RBP15.56■□□□□ 0.08
SMC4-211ENST00000469858 CPT2P23786 658 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 TMEM50BP56557 158 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 SSBP1Q04837 148 aaKnown RBP15.56■□□□□ 0.08
SMC4-211ENST00000469858 TATDN3Q17R31 274 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 AGAP6Q5VW22 663 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 TRAPPC6BQ86SZ2 158 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 FAM89BQ8N5H3 189 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 ZNF611Q8N823 705 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 OR8S1Q8NH09 359 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 ARHGAP5-AS1Q96IT6 56 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 HIST1H2AAQ96QV6 131 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 TM2D1Q9BX74 207 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 PIGMQ9H3S5 423 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 ZNF732B4DXR9 585 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 HNRNPCP07910 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMC4-211ENST00000469858 MELTFP08582 738 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 CA6P23280 308 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 FAM27E3Q08E93 113 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 ASCL4Q6XD76 172 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 PXT1Q8NFP0 134 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 OR51F2Q8NH61 342 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 CYYR1Q96J86 154 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 COPZ2Q9P299 210 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 MPC1Q9Y5U8 109 aa15.56■□□□□ 0.08
SMC4-211ENST00000469858 ZZEF1O43149 2961 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 IGHV2OR16-5A0A0B4J2B6 119 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 ZNF780AO75290 641 aaPredicted RBP15.55■□□□□ 0.08
SMC4-211ENST00000469858 GABRR1P24046 479 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 BLVRBP30043 206 aaPredicted RBP15.55■□□□□ 0.08
SMC4-211ENST00000469858 FAUP35544 74 aaKnown RBP15.55■□□□□ 0.08
SMC4-211ENST00000469858 HAAOP46952 286 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 ZNF83P51522 516 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 CD300CQ08708 224 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 SLC25A26Q70HW3 274 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 MRGPRGQ86SM5 289 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 OR4C16Q8NGL9 310 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 FAM122AQ96E09 287 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 Q96M66 194 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 ACTR6Q9GZN1 396 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 KCNK7Q9Y2U2 307 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 NUBP2Q9Y5Y2 271 aa15.55■□□□□ 0.08
SMC4-211ENST00000469858 CYB5AP00167 134 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms