RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FAHP16930 419 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 GLRA1P23415 457 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 RIPPLY1Q0D2K3 151 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 TMEM42Q69YG0 159 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 MEPCEQ7L2J0 689 aaKnown RBP13.38□□□□□ -0.27
COL9A3-208ENST00000469802 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 OR5A2Q8NGI9 324 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 AQP3Q92482 292 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 HIST1H2AAQ96QV6 131 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 MNTQ99583 582 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 MOB1AQ9H8S9 216 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 BEX1Q9HBH7 125 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 ZNRD1Q9P1U0 126 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 WIPF1O43516 503 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 GPR137BO60478 399 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 PSG2P11465 335 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 DLX1P56177 255 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 CXCR4P61073 352 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 GUCA2AQ02747 115 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 DMRTC1Q5HYR2 192 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 ZNF322Q6U7Q0 402 aaPredicted RBP13.37□□□□□ -0.27
COL9A3-208ENST00000469802 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 Q6ZSR3 168 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 COMMD2Q86X83 199 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 TCEANCQ8N8B7 351 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 NPRL2Q8WTW4 380 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
COL9A3-208ENST00000469802 SDSLQ96GA7 329 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 ENPP5Q9UJA9 477 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 PIGLQ9Y2B2 252 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 MAB21L2Q9Y586 359 aa13.37□□□□□ -0.27
COL9A3-208ENST00000469802 CLPSL1A2RUU4 121 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 G3V2T6 193 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 M0R1W7 72 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 KNG1P01042 644 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 CRYBA1P05813 215 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 FBP1P09467 338 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 PRB3Q04118 309 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-208ENST00000469802 KLRD1Q13241 179 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 TAF9Q16594 264 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 PLCXD3Q63HM9 321 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 OLFML2AQ68BL7 652 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 HAGHLQ6PII5 290 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-208ENST00000469802 THAP5Q7Z6K1 395 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 SLC35F2Q8IXU6 374 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 ELMOD2Q8IZ81 293 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 H1FXQ92522 213 aaKnown RBP13.36□□□□□ -0.27
COL9A3-208ENST00000469802 CITED1Q99966 193 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 APOL4Q9BPW4 351 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 SEMA6AQ9H2E6 1030 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 ELL3Q9HB65 397 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-208ENST00000469802 CLN6Q9NWW5 311 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
COL9A3-208ENST00000469802 R4GMQ9 66 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 V9GYS6 101 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 VWFP04275 2813 aa13.36□□□□□ -0.27
COL9A3-208ENST00000469802 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 A0A1B0GTI1 187 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 DHRS7CA6NNS2 312 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 LOC110117498-PIK3R3F6TDL0 507 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 NPFFO15130 113 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
COL9A3-208ENST00000469802 MTRF1O75570 445 aaKnown RBP13.35□□□□□ -0.27
COL9A3-208ENST00000469802 NDUFB7P17568 137 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 FASP25445 335 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 EGR3Q06889 387 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 TREML4Q6UXN2 200 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 ACP7Q6ZNF0 438 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 MOB3CQ70IA8 216 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 ZDHHC13Q8IUH4 622 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 GID4Q8IVV7 300 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 POC1AQ8NBT0 407 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 ZNRF1Q8ND25 227 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 ZNF671Q8TAW3 534 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 METTL8Q9H825 291 aaKnown RBP13.35□□□□□ -0.27
COL9A3-208ENST00000469802 RASL12Q9NYN1 266 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 WNK1Q9H4A3 2382 aa13.35□□□□□ -0.27
COL9A3-208ENST00000469802 PQLC2LA1A4F0 135 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 DLGAP1O14490 977 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 NRASP01111 189 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 CCL1P22362 96 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 SAA4P35542 130 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 GABRA2P47869 451 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 UBE2E1P51965 193 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
COL9A3-208ENST00000469802 SMIM21Q3B7S5 101 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 CLVS2Q5SYC1 327 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 ZNF684Q5T5D7 378 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 BCL2L15Q5TBC7 163 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 NCR3LG1Q68D85 454 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
COL9A3-208ENST00000469802 PLEKHG7Q6ZR37 379 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms