RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 HAAOP46952 286 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 HOXA4Q00056 320 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 GPR50Q13585 617 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 TPBGQ13641 420 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 Q499Y3 187 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 HAGHLQ6PII5 290 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF367Q7RTV3 350 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 OR13C9Q8NGT0 318 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 OR10Z1Q8NGY1 313 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF671Q8TAW3 534 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 AQP3Q92482 292 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 UFD1Q92890 307 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 BORCS8Q96FH0 119 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 MGLLQ99685 303 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 GAL3ST1Q99999 423 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 PPIAL4AQ9Y536 164 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 J3QT63 122 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 RHBDL1O75783 438 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 ALX3O95076 343 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 FSTL3O95633 263 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 EGR1P18146 543 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 CD80P33681 288 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 RBP2P50120 134 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 ATP1B3P54709 279 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 LIPKQ5VXJ0 399 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 ANGPTL5Q86XS5 388 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 MS4A15Q8N5U1 240 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 C19orf18Q8NEA5 215 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 SPSB1Q96BD6 273 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 OR14A2Q96R54 314 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 TAS2R4Q9NYW5 299 aa12.13□□□□□ -0.47
DNMT3A-208ENST00000466601 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF879B4DU55 563 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 LGALS8O00214 317 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 SULT1B1O43704 296 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 TNFAIP8O95379 198 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 HEXAP06865 529 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 CPEP16870 476 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 RAB3AP20336 220 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 PCMT1P22061 227 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 IL2RGP31785 369 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 MTCP1P56278 107 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 LMO4P61968 165 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 SFRP4Q6FHJ7 346 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 ASPHD2Q6ICH7 369 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 CALHM1Q8IU99 346 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 SPICQ8N5J4 248 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 TMED9Q9BVK6 235 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 POLDIP2Q9Y2S7 368 aa12.12□□□□□ -0.47
DNMT3A-208ENST00000466601 CR1P17927 2039 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 TRAV38-1A0A0B4J264 116 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 A0A1W2PPK0 400 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 OOEPA6NGQ2 149 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 AKR7A2O43488 359 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 SYNGR1O43759 233 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 HCKP08631 526 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 MPZP25189 248 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 GMFBP60983 142 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 ACSM3Q53FZ2 586 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 ARMCX4Q5H9R4 360 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 UBE2UQ5VVX9 321 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 TEX36Q5VZQ5 186 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 FCGR1BQ92637 280 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 THRSPQ92748 146 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 ORAI1Q96D31 301 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 SMR3AQ99954 134 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 PKIBQ9C010 78 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-208ENST00000466601 IGHV3OR15-7A0A075B7D8 119 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms